Gene: CSS0041842

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0041842
  • Transcript Identifier CSS0041842.1
  • Gene Type Coding gene
  • Location Chr13 : 50685827-50697532 : positive

Gene Family Information

  • ID HOM05D002168
  • #Genes/#Species 309/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0041842.1

Descriptions

  • Description PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X2 [Populus euphratica]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
InterPromRNA catabolic process
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT3G03710
GO:0006396
ISO
PLAZA Homology (enrichment)RNA processing HOM05D002168
GO:0006401
ISO
PLAZA Integrative OrthologyRNA catabolic process AT3G03710
GO:0016120
ISO
PLAZA Integrative Orthologycarotene biosynthetic process AT3G03710
GO:0016123
ISO
PLAZA Integrative Orthologyxanthophyll biosynthetic process AT3G03710
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT3G03710
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT3G03710
GO:0010323
ISO
PLAZA Integrative Orthologynegative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT3G03710

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0004654
IEA
InterPropolyribonucleotide nucleotidyltransferase activity
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D002168
GO:0000175
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity AT3G03710
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G03710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G03710
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G03710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001247 Exoribonuclease, phosphorolytic domain 1
IPR012162 Polyribonucleotide nucleotidyltransferase
IPR027408 PNPase/RNase PH domain superfamily
IPR020568 Ribosomal protein S5 domain 2-type fold
Mapman id Description
16.11.1.1 RNA processing.organelle machinery.ribonuclease activities.polynucleotide phosphorylase (PNP)