Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g038120.3 Solanum lycopersicum HOM05D003938 ORTHO05D004759 5.3e-119 431.0 215 100.0
PGSC0003DMG400004370 Solanum tuberosum HOM05D003938 ORTHO05D004759 8.8e-90 334.0 209 82.8
Sopen02g012840 Solanum pennellii HOM05D003938 ORTHO05D004759 1.8e-87 326.2 207 80.7
Sopen12g023920 Solanum pennellii HOM05D003938 ORTHO05D004759 2.3e-82 309.3 206 78.6
Solyc12g049430.1 Solanum lycopersicum HOM05D003938 ORTHO05D004759 5.2e-82 308.1 208 78.4
PGSC0003DMG400026878 Solanum tuberosum HOM05D003938 ORTHO05D004759 2.3e-74 282.7 184 77.2
Sopen12g031080 Solanum pennellii HOM05D003938 ORTHO05D004759 1.1e-71 273.9 202 70.3
Solyc07g066420.4 Solanum lycopersicum HOM05D003938 ORTHO05D004759 3.7e-64 248.8 238 59.7
Peaxi162Scf00452g00848 Petunia axillaris HOM05D003938 ORTHO05D004759 5.9e-62 241.5 237 57.8
MSTRG.16112 Avicennia marina HOM05D003938 ORTHO05D004759 4.3e-60 235.3 213 60.1
SGA_v2.0_scaffold7G03579 Striga asiatica HOM05D003938 ORTHO05D004759 7.3e-60 234.6 210 61.0
Sopen07g034590 Solanum pennellii HOM05D003938 ORTHO05D004759 9.5e-60 234.2 238 57.1
Nitab4.5_0001749g0120 Nicotiana tabacum HOM05D003938 ORTHO05D004759 4.7e-59 231.9 191 66.5
Nitab4.5_0009317g0010 Nicotiana tabacum HOM05D003938 ORTHO05D004759 3.0e-58 229.2 223 58.7
Dinv19621 Davidia involucrata HOM05D003938 ORTHO05D004759 8.9e-58 227.6 245 54.7
Gohir.A05G003300 Gossypium hirsutum HOM05D003938 ORTHO05D004759 3.4e-57 225.7 207 58.9
GSVIVG01020281001 Vitis vinifera HOM05D003938 ORTHO05D004759 4.4e-57 225.3 208 60.1
Glyma.19G004200 Glycine max HOM05D003938 ORTHO05D004759 5.7e-57 224.9 158 71.5
Gorai.009G003300 Gossypium raimondii HOM05D003938 ORTHO05D004759 5.7e-57 224.9 207 58.5
CAN.G943.34 Capsicum annuum HOM05D003938 ORTHO05D004759 9.8e-57 224.2 219 58.9
Cc05_g16030 Coffea canephora HOM05D003938 ORTHO05D004759 1.7e-56 223.4 213 57.3
Duzib168G1061 Durio zibethinus HOM05D003938 ORTHO05D004759 2.2e-56 223.0 206 60.2
Migut.M01560 Erythranthe guttata HOM05D003938 ORTHO05D004759 2.9e-56 222.6 198 60.6
Phvul.011G177175 Phaseolus vulgaris HOM05D003938 ORTHO05D004759 3.7e-56 222.2 158 70.3
Glyma.15G213200 Glycine max HOM05D003938 ORTHO05D004759 4.9e-56 221.9 158 70.9
Medtr8g442420 Medicago truncatula HOM05D003938 ORTHO05D004759 4.9e-56 221.9 199 59.8
Lsat_1_v5_gn_7_71321 Lactuca sativa HOM05D003938 ORTHO05D004759 6.4e-56 221.5 166 66.9
Manes.06G173850 Manihot esculenta HOM05D003938 ORTHO05D004759 6.4e-56 221.5 215 57.2
Gohir.D05G003701 Gossypium hirsutum HOM05D003938 ORTHO05D004759 8.3e-56 221.1 157 70.1
AL1G62420 Arabidopsis lyrata HOM05D003938 ORTHO05D004759 2.4e-55 219.5 204 57.4
CsaV3_7G022770 Cucumis sativus L. HOM05D003938 ORTHO05D004759 3.2e-55 219.2 208 57.7
unitig_26.g10081 Utricularia gibba HOM05D003938 ORTHO05D004759 3.2e-55 219.2 212 56.6
AUR62040863 Chenopodium quinoa HOM05D003938 ORTHO05D004759 4.1e-55 218.8 210 55.7
Lalb_Chr01g0007211 Lupinus albus HOM05D003938 ORTHO05D004759 4.1e-55 218.8 234 54.3
AUR62037621 Chenopodium quinoa HOM05D003938 ORTHO05D004759 5.4e-55 218.4 210 55.7
Thhalv10011414m.g Eutrema salsugineum HOM05D003938 ORTHO05D004759 5.4e-55 218.4 204 57.8
CSS0000259 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 1.2e-54 217.2 231 53.2
MD05G1222400 Malus domestica HOM05D003938 ORTHO05D004759 1.2e-54 217.2 213 57.3
Sp1g38950 Schrenkiella parvula HOM05D003938 ORTHO05D004759 1.2e-54 217.2 215 54.4
MELO3C012622.2 Cucumis melo HOM05D003938 ORTHO05D004759 1.6e-54 216.9 208 57.7
Lj3g0013935 Lotus japonicus HOM05D003938 ORTHO05D004759 2.0e-54 216.5 229 54.6
TAR626G0088 Trochodendron aralioides HOM05D003938 ORTHO05D004759 2.7e-54 216.1 225 55.6
Aa31LG10G170 Aethionema arabicum HOM05D003938 ORTHO05D004759 3.5e-54 215.7 204 57.8
CSS0019207 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 5.9e-54 214.9 158 67.1
Sc09g0007280 Simmondsia chinensis HOM05D003938 ORTHO05D004759 5.9e-54 214.9 240 50.8
Eucgr.F01467 Eucalyptus grandis HOM05D003938 ORTHO05D004759 7.8e-54 214.5 213 55.9
Potri.005G097500 Populus trichocarpa HOM05D003938 ORTHO05D004759 7.8e-54 214.5 232 54.3
Sed0018665 Sechium edule HOM05D003938 ORTHO05D004759 7.8e-54 214.5 221 54.8
Lj8A187T28 Lonicera japonica HOM05D003938 ORTHO05D004759 1.0e-53 214.2 156 70.5
MD10G1204000 Malus domestica HOM05D003938 ORTHO05D004759 1.0e-53 214.2 213 54.9
Prupe.4G137900 Prunus persica HOM05D003938 ORTHO05D004759 1.0e-53 214.2 214 56.1
THA.LOC104822756 Tarenaya hassleriana HOM05D003938 ORTHO05D004759 1.0e-53 214.2 162 67.3
QL04p077115 Quercus lobata HOM05D003938 ORTHO05D004759 1.3e-53 213.8 194 58.2
CSS0016392 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 2.3e-53 213.0 231 52.8
arahy.Tifrunner.gnm1.ann1.TD7I6F Arachis hypogaea HOM05D003938 ORTHO05D004759 3.9e-53 212.2 212 57.1
Actinidia07348 Actinidia chinensis HOM05D003938 ORTHO05D004759 6.6e-53 211.5 206 56.3
CARHR044020 Cardamine hirsuta HOM05D003938 ORTHO05D004759 8.6e-53 211.1 204 55.9
Carub.0001s4300 Capsella rubella HOM05D003938 ORTHO05D004759 1.1e-52 210.7 195 58.5
arahy.Tifrunner.gnm1.ann1.KA488U Arachis hypogaea HOM05D003938 ORTHO05D004759 1.9e-52 209.9 212 56.6
CiPaw.01G119900 Carya illinoinensis HOM05D003938 ORTHO05D004759 5.6e-52 208.4 147 70.7
FAN25G2080 Fragaria x ananassa HOM05D003938 ORTHO05D004759 5.6e-52 208.4 205 57.1
RcHm_v2.0_Chr5g0026161 Rosa chinensis HOM05D003938 ORTHO05D004759 5.6e-52 208.4 205 57.6
PSO717G0129 Papaver somniferum HOM05D003938 ORTHO05D004759 7.3e-52 208.0 165 65.5
Aqoxy3G04185_Aqoxy3G04186 Aquilegia oxysepala HOM05D003938 ORTHO05D004759 9.5e-52 207.6 232 51.3
FvH4_3g15530 Fragaria vesca HOM05D003938 ORTHO05D004759 1.2e-51 207.2 205 56.6
FAN11G2591 Fragaria x ananassa HOM05D003938 ORTHO05D004759 1.2e-51 207.2 155 66.5
FAN21G1947 Fragaria x ananassa HOM05D003938 ORTHO05D004759 1.6e-51 206.8 205 56.6
FAN16G1651 Fragaria x ananassa HOM05D003938 ORTHO05D004759 2.8e-51 206.1 205 56.1
PSO675G9176 Papaver somniferum HOM05D003938 ORTHO05D004759 2.8e-51 206.1 165 64.8
Sabra05G0079800 Salix brachista HOM05D003938 ORTHO05D004759 3.6e-51 205.7 248 49.2
Ca_12645_v3 Cicer arietinum L. HOM05D003938 ORTHO05D004759 6.2e-51 204.9 156 66.0
Nn7g37935 Nelumbo nucifera HOM05D003938 ORTHO05D004759 6.2e-51 204.9 214 54.2
CDE01G0219 Ceratophyllum demersum HOM05D003938 ORTHO05D004759 8.0e-51 204.5 159 65.4
Medtr6g084140 Medicago truncatula HOM05D003938 ORTHO05D004759 1.0e-50 204.1 175 62.3
TPR.G22448 Trifolium pratense HOM05D003938 ORTHO05D004759 1.4e-50 203.8 180 61.1
HanXRQChr05g0160881 Helianthus annuus HOM05D003938 ORTHO05D004759 2.3e-50 203.0 146 67.8
AT1G53720 Arabidopsis thaliana HOM05D003938 ORTHO05D004759 3.1e-50 202.6 203 54.7
TPR.G9407 Trifolium pratense HOM05D003938 ORTHO05D004759 4.0e-50 202.2 209 54.1
TWI74G0164 Tripterygium wilfordii HOM05D003938 ORTHO05D004759 4.0e-50 202.2 202 57.4
CANSAT80G1380 Cannabis sativa HOM05D003938 ORTHO05D004759 5.2e-50 201.8 200 55.0
Carub.0008s0543 Capsella rubella HOM05D003938 ORTHO05D004759 2.6e-49 199.5 214 51.4
ECA240G3729 Erigeron canadensis HOM05D003938 ORTHO05D004759 4.4e-49 198.7 236 50.8
Ciclev10004604m.g Citrus clementina HOM05D003938 ORTHO05D004759 1.3e-48 197.2 227 48.5
PGR119G1566 Punica granatum HOM05D003938 ORTHO05D004759 1.3e-48 197.2 146 68.5
Thecc.09G180900 Theobroma cacao HOM05D003938 ORTHO05D004759 1.7e-48 196.8 281 43.8
A08p00110 Brassica napus HOM05D000173 ORTHO05D008065 2.2e-48 196.4 191 55.0
BraA08t32068Z Brassica rapa HOM05D003938 ORTHO05D008065 2.2e-48 196.4 191 55.0
ATR0763G204 Amborella trichopoda HOM05D003938 ORTHO05D004759 6.4e-48 194.9 209 54.5
BcaB04g16924 Brassica carinata HOM05D003938 ORTHO05D004759 2.4e-47 193.0 191 54.5
BolC3t21636H Brassica oleracea HOM05D003938 ORTHO05D008065 2.4e-47 193.0 191 54.5
C03p93390 Brassica napus HOM05D003938 ORTHO05D008065 3.2e-47 192.6 191 54.5
EL10Ac2g03350 Beta vulgaris HOM05D003938 ORTHO05D004759 1.6e-46 190.3 258 43.4
SMO351G0536 Selaginella moellendorffii HOM05D003938 ORTHO05D004759 2.7e-46 189.5 159 62.3
HPP92_008853 Vanilla planifolia HOM05D003938 ORTHO05D004759 1.0e-45 187.6 212 50.9
Os06g0670500 Oryza sativa ssp. japonica HOM05D003938 ORTHO05D004759 1.3e-45 187.2 197 54.3
HPP92_008859 Vanilla planifolia HOM05D003938 ORTHO05D004759 2.3e-45 186.4 212 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1871 Anthoceros agrestis HOM05D003938 ORTHO05D004759 3.0e-45 186.0 159 59.7
Zm00001eb274050 Zea mays HOM05D003938 ORTHO05D004759 3.0e-45 186.0 211 50.2
Mapoly0010s0175 Marchantia polymorpha HOM05D003938 ORTHO05D004759 3.3e-44 182.6 181 54.1
Psat4g174120 Pisum sativum HOM05D003938 ORTHO05D004759 4.3e-44 182.2 168 59.5
ClCG09G022610 Citrullus lanatus HOM05D003938 ORTHO05D004759 8.1e-43 177.9 315 40.0
Sopen12g017720 Solanum pennellii HOM05D000006 ORTHO05D000001 8.1e-43 177.9 163 57.7
Pp3c1_5600 Physcomitrium patens HOM05D003938 ORTHO05D004759 1.1e-42 177.6 160 58.1
CSS0024659 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 1.4e-42 177.2 231 48.1
Solyc02g061800.2 Solanum lycopersicum HOM05D003938 ORTHO05D004759 5.2e-42 175.3 145 66.2
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 8.9e-42 174.5 127 66.9
Nitab4.5_0004242g0030 Nicotiana tabacum HOM05D003938 ORTHO05D004759 4.4e-41 172.2 136 66.2
PSO675G8491 Papaver somniferum HOM05D003938 ORTHO05D004759 4.4e-41 172.2 183 53.6
Ciclev10007155m.g Citrus clementina HOM05D003938 ORTHO05D004759 7.5e-41 171.4 154 56.5
CSS0007376 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 9.8e-41 171.0 225 47.6
EL10Ac6g14412 Beta vulgaris HOM05D003938 ORTHO05D004759 3.2e-39 166.0 165 53.3
ECA248G1281 Erigeron canadensis HOM05D003938 ORTHO05D004759 1.3e-37 160.6 129 66.7
EL10Ac6g14407 Beta vulgaris HOM05D003938 ORTHO05D004759 3.0e-37 159.5 157 58.0
PSO447G0031 Papaver somniferum HOM05D003938 ORTHO05D004759 1.5e-36 157.1 144 54.9
Solyc12g038020.3 Solanum lycopersicum HOM05D003938 ORTHO05D004759 1.9e-36 156.8 121 68.6
Cre11.g479850 Chlamydomonas reinhardtii HOM05D003938 ORTHO05D004759 2.5e-36 156.4 169 49.7
DCAR_013743 Daucus carota HOM05D003938 ORTHO05D004759 1.2e-35 154.1 123 65.9
Haze_26935 Corylus avellana HOM05D003938 ORTHO05D004759 8.1e-35 151.4 145 54.5
AUR62039463 Chenopodium quinoa HOM05D003938 ORTHO05D004759 1.8e-34 150.2 135 57.0
MCO01G120 Micromonas commoda HOM05D003938 ORTHO05D004759 3.4e-33 146.0 144 52.1
Haze_07842 Corylus avellana HOM05D003938 ORTHO05D004759 6.4e-32 141.7 101 70.3
SMO353G0235 Selaginella moellendorffii HOM05D003938 ORTHO05D004759 9.2e-31 137.9 135 53.3
PGSC0003DMG400017036 Solanum tuberosum HOM05D003938 ORTHO05D004759 9.2e-31 137.9 99 69.7
VMungo1127G1769 Vigna mungo HOM05D003938 ORTHO05D004759 9.2e-31 137.9 99 69.7
THA.LOC104822789 Tarenaya hassleriana HOM05D003938 ORTHO05D004759 3.9e-29 132.5 108 62.0
PGSC0003DMG400004369 Solanum tuberosum HOM05D003938 ORTHO05D004759 1.1e-28 131.0 130 56.9
Cfa023095 Carpinus fangiana HOM05D003938 ORTHO05D004759 9.6e-28 127.9 184 41.8
Atru.chr1.190 Acer truncatum HOM05D003938 ORTHO05D004759 2.8e-27 126.3 150 51.3
Cpa.g.sc331.3 Carica papaya HOM05D003938 ORTHO05D004759 1.1e-26 124.4 98 63.3
Aqoxy7G03516 Aquilegia oxysepala HOM05D003938 ORTHO05D004759 1.8e-26 123.6 130 54.6
Solyc09g018480.1 Solanum lycopersicum HOM05D003938 ORTHO05D004759 6.9e-26 121.7 84 69.0
Sopen12g023950 Solanum pennellii HOM05D003938 ORTHO05D004759 2.6e-25 119.8 139 49.6
vmacro11660 Vaccinium macrocarpon HOM05D003938 ORTHO05D004759 9.9e-25 117.9 235 37.0
Os06g0670400 Oryza sativa ssp. japonica HOM05D003938 ORTHO05D004759 3.2e-23 112.8 111 58.6
AL1G53090 Arabidopsis lyrata HOM05D000070 ORTHO05D004759 9.3e-23 111.3 154 43.5
PRCOL_00005663 Prasinoderma coloniale HOM05D000144 ORTHO05D004759 2.3e-21 106.7 107 50.5
AagrBONN_evm.TU.Sc2ySwM_344.2630 Anthoceros agrestis HOM05D003938 ORTHO05D004759 2.5e-20 103.2 147 44.2
CBR_g2919 Chara braunii HOM05D003938 ORTHO05D004759 2.5e-20 103.2 81 64.2
SHI21597 Sapria himalayana HOM05D003938 ORTHO05D004759 9.0e-18 94.7 88 58.0
Solyc12g038150.1 Solanum lycopersicum HOM05D003938 ORTHO05D004759 2.9e-16 89.7 73 65.8
Sopen12g017810 Solanum pennellii HOM05D003308 ORTHO05D000977 4.9e-16 89.0 73 65.8
SEGI_12892 Sequoiadendron giganteum HOM05D003938 ORTHO05D004759 2.1e-14 83.6 73 54.8
MBI01_g43617_MAGBIO Magnolia biondii HOM05D003938 ORTHO05D004759 4.6e-14 82.4 78 57.7
TPR.G24716 Trifolium pratense HOM05D003938 ORTHO05D004759 6.0e-14 82.0 63 63.5
PGSC0003DMG400021758 Solanum tuberosum HOM05D003938 ORTHO05D004759 1.8e-13 80.5 52 73.1
Solyc12g038010.1 Solanum lycopersicum HOM05D003938 ORTHO05D004759 3.9e-13 79.3 63 68.3
VMungo1127G1443 Vigna mungo HOM05D003938 ORTHO05D004759 6.2e-11 72.0 95 47.4
PGSC0003DMG400022237 Solanum tuberosum HOM05D003938 ORTHO05D004759 9.9e-09 64.7 112 42.9
Potri.007G067000 Populus trichocarpa HOM05D003938 ORTHO05D004759 3.8e-08 62.8 93 45.2
Oeu003830.4 Olea europaea HOM05D003938 ORTHO05D004759 3.2e-07 59.7 33 81.8
AL1G64340 Arabidopsis lyrata HOM05D003938 ORTHO05D004759 5.5e-07 58.9 57 54.4
Nitab4.5_0004242g0040 Nicotiana tabacum HOM05D003938 ORTHO05D004759 6.0e-06 55.5 83 42.2


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