Gene: TPR.G9407
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G9407
- Transcript Identifier TPR.T9722
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_209 : 145435-153296 : negative
Gene Family Information
- ID HOM05D003938
- #Genes/#Species 177/93
- Phylogenetic origin
- ID ORTHO05D004759
- #Genes/#Species 172/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA9722.v2
- id Tp57577_TGAC_v2_gene9407.v2
- pacid 35960253
- uniprot A0A2K3N1B3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000413 | IEA | GOA Database | protein peptidyl-prolyl isomerization | |
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003755 | IEA | GOA Database | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G53720 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G53720 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G53720 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR001878 | Zinc finger, CCHC-type |
| IPR029000 | Cyclophilin-like domain superfamily |
| IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain |
| IPR000504 | RNA recognition motif domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR035542 | Cyclophilin-RNA interacting protein |
| Mapman id | Description |
|---|---|
| 50.5.2 | Enzyme classification.EC_5 isomerases.EC_5.2 cis-trans-isomerase |