Gene: Carub.0008s0543
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s0543
- Transcript Identifier Carub.0008s0543.1
- Gene Type Coding gene
- Location scaffold_8 : 2416991-2419084 : positive
Gene Family Information
- ID HOM05D003938
- #Genes/#Species 177/93
- Phylogenetic origin
- ID ORTHO05D004759
- #Genes/#Species 172/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0008s0543.v1.1
- pacid 39250224
- synonym Carubv10026436m.g
Descriptions
- Description K12735 - peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8] (PPIL4)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D003938 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029000 | Cyclophilin-like domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR003954 | RNA recognition motif domain, eukaryote |
| IPR035542 | Cyclophilin-RNA interacting protein |
| IPR035538 | PPIL4-like, cyclophilin domain |
| Mapman id | Description |
|---|---|
| 50.5.2 | Enzyme classification.EC_5 isomerases.EC_5.2 cis-trans-isomerase |