Gene: Nitab4.5_0004242g0030

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0004242g0030
  • Transcript Identifier Nitab4.5_0004242g0030.1
  • Gene Type Coding gene
  • Location Nitab4.5_0004242 : 149102-150224 : positive

Gene Family Information

  • ID HOM05D003938
  • #Genes/#Species 177/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0004242g0030.1
  • SR1-identifier Nta14g12910.1

Descriptions

  • Description Nucleotide-binding, alpha-beta plait, Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain, RNA recognition motif domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000413
IEA
InterProprotein peptidyl-prolyl isomerization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D003938
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G53720
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G53720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G53720
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G53720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR029000 Cyclophilin-like domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035542 Cyclophilin-RNA interacting protein
Mapman id Description
50.5.2 Enzyme classification.EC_5 isomerases.EC_5.2 cis-trans-isomerase