Gene: BolC3t21636H
General Information
Structural Information
- Species Brassica oleracea
- Gene Identifier BolC3t21636H
- Transcript Identifier BolC3t21636H
- Gene Type Coding gene
- Location C3 : 73636456-73641118 : positive
Gene Family Information
- ID HOM05D003938
- #Genes/#Species 177/93
- Phylogenetic origin
- ID ORTHO05D008065
- #Genes/#Species 123/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization | |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT3G33520 |
| GO:0030029 | ISO | PLAZA Integrative Orthology | actin filament-based process | AT3G33520 |
| GO:0006338 | ISO | PLAZA Integrative Orthology | chromatin remodeling | AT3G33520 |
| GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT3G33520 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT3G33520 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT3G33520 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT3G33520 |
| GO:0009910 | ISO | PLAZA Integrative Orthology | negative regulation of flower development | AT3G33520 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT1G53720 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G53720 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G53720 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G53720 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029000 | Cyclophilin-like domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR043129 | ATPase, nucleotide binding domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035538 | PPIL4-like, cyclophilin domain |
| IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain |
| IPR001878 | Zinc finger, CCHC-type |
| IPR035542 | Cyclophilin-RNA interacting protein |
| IPR004000 | Actin family |
| Mapman id | Description |
|---|---|
| 12.4.4.4 | Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.component ARP6 |