Gene: Solyc12g038010.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g038010.1
  • Transcript Identifier Solyc12g038010.1.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 48040757-48041494 : negative

Gene Family Information

  • ID HOM05D003938
  • #Genes/#Species 177/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g038010.1.1
  • uniprot K4DEF6
  • gene_id Solyc12g038010

Descriptions

  • Description Peptidyl-prolyl cis-trans isomerase-like 4 (AHRD V3.3 *-* A0A1U8HK02_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000413
IEA
GOA Databaseprotein peptidyl-prolyl isomerization
GO:1901407
IBA
GOA Databaseregulation of phosphorylation of RNA polymerase II C-terminal domain

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003755
IEA
GOA Databasepeptidyl-prolyl cis-trans isomerase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D003938
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D003938
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G53720
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G53720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G53720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035542 Cyclophilin-RNA interacting protein
IPR029000 Cyclophilin-like domain superfamily
Mapman id Description
35.1 not assigned.annotated