Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2013 Erigeron canadensis HOM05D002640 ORTHO05D003231 7.1e-56 220.3 108 100.0
ECA236G4010 Erigeron canadensis HOM05D002640 ORTHO05D003231 2.5e-40 168.7 99 84.8
HanXRQChr06g0177131 Helianthus annuus HOM05D002640 ORTHO05D003231 2.3e-38 162.2 99 79.8
Lsat_1_v5_gn_8_83860 Lactuca sativa HOM05D002640 ORTHO05D003231 5.1e-38 161.0 99 78.8
GSVIVG01025815001 Vitis vinifera HOM05D002640 ORTHO05D003231 5.7e-37 157.5 99 75.8
Lj2C412G3 Lonicera japonica HOM05D002640 ORTHO05D003231 9.7e-37 156.8 99 75.8
Dinv10811 Davidia involucrata HOM05D002640 ORTHO05D003231 1.6e-36 156.0 99 75.8
Oeu022996.1 Olea europaea HOM05D002640 ORTHO05D003231 6.3e-36 154.1 99 75.8
TAR623G0852 Trochodendron aralioides HOM05D002640 ORTHO05D003231 6.3e-36 154.1 99 74.7
CSS0028254 Camellia sinensis var. sinensis HOM05D002640 ORTHO05D003231 1.8e-35 152.5 99 74.7
Oeu044234.2 Olea europaea HOM05D002640 ORTHO05D003231 1.8e-35 152.5 99 74.7
ClCG11G010450 Citrullus lanatus HOM05D002640 ORTHO05D003231 2.4e-35 152.1 99 73.7
MELO3C008653.2 Cucumis melo HOM05D002640 ORTHO05D003231 2.4e-35 152.1 99 73.7
CsaV3_2G009910 Cucumis sativus L. HOM05D002640 ORTHO05D003231 2.4e-35 152.1 99 73.7
MD00G1108000 Malus domestica HOM05D002640 ORTHO05D003231 2.4e-35 152.1 99 72.7
Prupe.7G019900 Prunus persica HOM05D002640 ORTHO05D003231 2.4e-35 152.1 99 72.7
Cc06_g21410 Coffea canephora HOM05D002640 ORTHO05D003231 4.1e-35 151.4 99 73.7
SalBow6G2030 Salvia bowleyana HOM05D002640 ORTHO05D003231 6.9e-35 150.6 99 73.7
Actinidia37853 Actinidia chinensis HOM05D002640 ORTHO05D003231 9.0e-35 150.2 99 73.7
HanXRQChr04g0125591 Helianthus annuus HOM05D002640 ORTHO05D003231 2.0e-34 149.1 99 74.7
Sed0027584 Sechium edule HOM05D002640 ORTHO05D003231 2.0e-34 149.1 99 71.7
MSTRG.6300 Avicennia marina HOM05D002640 ORTHO05D003231 3.4e-34 148.3 99 72.7
Eucgr.K01682 Eucalyptus grandis HOM05D002640 ORTHO05D003231 3.4e-34 148.3 100 73.0
Nn7g37023 Nelumbo nucifera HOM05D002640 ORTHO05D003231 4.5e-34 147.9 99 72.7
QL07p013828 Quercus lobata HOM05D002640 ORTHO05D003231 4.5e-34 147.9 99 71.7
SGA_v2.0_scaffold66G22308 Striga asiatica HOM05D002640 ORTHO05D003231 4.5e-34 147.9 99 72.7
CiPaw.09G052100 Carya illinoinensis HOM05D002640 ORTHO05D003231 5.9e-34 147.5 99 71.7
Dinv13155 Davidia involucrata HOM05D002640 ORTHO05D003231 5.9e-34 147.5 99 72.7
PSO339G4261 Papaver somniferum HOM05D002640 ORTHO05D003231 5.9e-34 147.5 99 71.7
PSO384G3455 Papaver somniferum HOM05D002640 ORTHO05D003231 5.9e-34 147.5 99 71.7
Haze_20287 Corylus avellana HOM05D002640 ORTHO05D003231 1.0e-33 146.7 99 70.7
Rhsim04G0118000 Rhododendron simsii HOM05D002640 ORTHO05D003231 1.0e-33 146.7 99 70.7
CAN.G128.94 Capsicum annuum HOM05D002640 ORTHO05D003231 1.3e-33 146.4 99 71.7
RcHm_v2.0_Chr3g0494601 Rosa chinensis HOM05D002640 ORTHO05D003231 1.7e-33 146.0 99 70.7
CANSAT64G1505 Cannabis sativa HOM05D002640 ORTHO05D003231 2.9e-33 145.2 99 69.7
MD10G1173400 Malus domestica HOM05D002640 ORTHO05D003231 2.9e-33 145.2 99 71.7
Actinidia38202 Actinidia chinensis HOM05D002640 ORTHO05D003231 6.5e-33 144.1 99 69.7
Solyc10g081020.2 Solanum lycopersicum HOM05D002640 ORTHO05D003231 6.5e-33 144.1 99 70.7
Sopen10g031530 Solanum pennellii HOM05D002640 ORTHO05D003231 6.5e-33 144.1 99 70.7
PGSC0003DMG400028197 Solanum tuberosum HOM05D002640 ORTHO05D003231 6.5e-33 144.1 99 70.7
Cpa.g.sc1617.1 Carica papaya HOM05D002640 ORTHO05D003231 8.5e-33 143.7 99 72.7
vmacro08975 Vaccinium macrocarpon HOM05D002640 ORTHO05D003231 8.5e-33 143.7 99 68.7
FvH4_1g29220 Fragaria vesca HOM05D002640 ORTHO05D003231 1.1e-32 143.3 99 68.7
FAN26G3239 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.4e-32 142.9 99 68.7
Peaxi162Scf00601g00007 Petunia axillaris HOM05D002640 ORTHO05D003231 1.4e-32 142.9 99 67.7
Carub.0002s1117 Capsella rubella HOM05D002640 ORTHO05D003231 1.9e-32 142.5 99 70.7
QL07p013799 Quercus lobata HOM05D002640 ORTHO05D003231 1.9e-32 142.5 99 69.7
FAN28G1238 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.5e-32 142.1 99 67.7
Gohir.A10G191700 Gossypium hirsutum HOM05D002640 ORTHO05D003231 2.5e-32 142.1 99 69.7
Gohir.D10G199500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 2.5e-32 142.1 99 69.7
Gorai.011G223600 Gossypium raimondii HOM05D002640 ORTHO05D003231 2.5e-32 142.1 99 69.7
Sc19g0007910 Simmondsia chinensis HOM05D002640 ORTHO05D003231 2.5e-32 142.1 99 69.7
Atru.chr1.1380 Acer truncatum HOM05D002640 ORTHO05D003231 3.2e-32 141.7 99 70.7
FAN19G2288 Fragaria x ananassa HOM05D002640 ORTHO05D003231 3.2e-32 141.7 99 67.7
Hund19066 Selenicereus undatus HOM05D002640 ORTHO05D003231 3.2e-32 141.7 99 69.7
AL2G22130 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 4.2e-32 141.4 99 69.7
FAN23G1939 Fragaria x ananassa HOM05D002640 ORTHO05D003231 5.5e-32 141.0 99 67.7
Aa31LG2G2460 Aethionema arabicum HOM05D002640 ORTHO05D003231 7.2e-32 140.6 99 69.7
EL10Ac3g07304 Beta vulgaris HOM05D002640 ORTHO05D003231 7.2e-32 140.6 99 71.7
CARHR057100 Cardamine hirsuta HOM05D002640 ORTHO05D003231 7.2e-32 140.6 99 69.7
MBI13_g02373_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 7.2e-32 140.6 99 66.7
Thhalv10018001m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 9.3e-32 140.2 99 68.7
BolC2t07860H Brassica oleracea HOM05D002640 ORTHO05D003231 1.2e-31 139.8 100 68.0
BraA02t06378Z Brassica rapa HOM05D002640 ORTHO05D003231 1.2e-31 139.8 100 68.0
Sp5g20200 Schrenkiella parvula HOM05D002640 ORTHO05D003231 1.2e-31 139.8 99 69.7
A02p13220 Brassica napus HOM05D002640 ORTHO05D003231 1.6e-31 139.4 99 68.7
C02p17450 Brassica napus HOM05D002640 ORTHO05D003231 1.6e-31 139.4 99 68.7
Thecc.10G133700 Theobroma cacao HOM05D002640 ORTHO05D003231 1.6e-31 139.4 99 68.7
Gohir.A06G172600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 2.1e-31 139.0 99 65.7
Gohir.D06G181500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 2.1e-31 139.0 99 65.7
AT1G65440 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 3.6e-31 138.3 99 68.7
Gorai.010G212900 Gossypium raimondii HOM05D002640 ORTHO05D003231 3.6e-31 138.3 99 65.7
BolC6t38997H Brassica oleracea HOM05D002640 ORTHO05D003231 4.6e-31 137.9 100 67.0
BraA07t30909Z Brassica rapa HOM05D002640 ORTHO05D003231 4.6e-31 137.9 100 67.0
Duzib106G1211 Durio zibethinus HOM05D002640 ORTHO05D003231 4.6e-31 137.9 99 67.7
Duzib114G0695 Durio zibethinus HOM05D002640 ORTHO05D003231 4.6e-31 137.9 99 67.7
Nitab4.5_0000062g0270 Nicotiana tabacum HOM05D002640 ORTHO05D003231 4.6e-31 137.9 99 68.7
Nitab4.5_0003225g0040 Nicotiana tabacum HOM05D002640 ORTHO05D003231 4.6e-31 137.9 99 68.7
A07p32820 Brassica napus HOM05D002640 ORTHO05D003231 6.1e-31 137.5 99 67.7
C06p39050 Brassica napus HOM05D002640 ORTHO05D003231 6.1e-31 137.5 99 67.7
THA.LOC104805690 Tarenaya hassleriana HOM05D002640 ORTHO05D003231 1.4e-30 136.3 99 67.7
Manes.08G162401 Manihot esculenta HOM05D002640 ORTHO05D003231 1.8e-30 136.0 99 67.7
Potri.016G029200 Populus trichocarpa HOM05D002640 ORTHO05D003231 2.3e-30 135.6 99 65.7
Ah.04g150530 Amaranthus hybridus HOM05D002640 ORTHO05D003231 3.0e-30 135.2 99 67.7
DCAR_020604 Daucus carota HOM05D002640 ORTHO05D003231 3.0e-30 135.2 99 65.7
AUR62018416 Chenopodium quinoa HOM05D002640 ORTHO05D003231 3.9e-30 134.8 99 67.7
Ciclev10013566m.g Citrus clementina HOM05D002640 ORTHO05D003231 3.9e-30 134.8 99 67.7
TWI77G0284 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 3.9e-30 134.8 99 66.7
Migut.J01544 Erythranthe guttata HOM05D002640 ORTHO05D003231 6.7e-30 134.0 99 67.7
Migut.J01553 Erythranthe guttata HOM05D002640 ORTHO05D003231 6.7e-30 134.0 99 67.7
HanXRQChr10g0298481 Helianthus annuus HOM05D002640 ORTHO05D003231 8.8e-30 133.7 99 69.7
Lsat_1_v5_gn_9_32200 Lactuca sativa HOM05D002640 ORTHO05D003231 1.1e-29 133.3 99 68.7
Potri.006G031900 Populus trichocarpa HOM05D002640 ORTHO05D003231 1.1e-29 133.3 99 64.6
Sabra16G0033200 Salix brachista HOM05D002640 ORTHO05D003231 1.1e-29 133.3 99 64.6
TWI53G2001 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 1.1e-29 133.3 99 66.7
Prupe.8G211800 Prunus persica HOM05D002640 ORTHO05D003231 1.5e-29 132.9 102 63.7
Sabra06G0021300 Salix brachista HOM05D002640 ORTHO05D003231 1.5e-29 132.9 99 64.6
Aqoxy1G00051 Aquilegia oxysepala HOM05D002640 ORTHO05D003231 1.9e-29 132.5 101 64.4
COL.COLO4_10242 Corchorus olitorius HOM05D002640 ORTHO05D003231 3.3e-29 131.7 100 64.0
DCAR_013529 Daucus carota HOM05D002640 ORTHO05D003231 4.3e-29 131.3 99 65.7
unitig_21.g20682 Utricularia gibba HOM05D002640 ORTHO05D003231 4.3e-29 131.3 99 63.6
HPP92_011291 Vanilla planifolia HOM05D002640 ORTHO05D003231 9.7e-29 130.2 99 62.6
GSVIVG01012377001 Vitis vinifera HOM05D002640 ORTHO05D003231 2.8e-28 128.6 99 61.6
PGR142G0829 Punica granatum HOM05D002640 ORTHO05D003231 4.8e-28 127.9 99 64.6
ECA247G4078 Erigeron canadensis HOM05D002640 ORTHO05D003231 2.4e-27 125.6 99 64.6
QL04p022161 Quercus lobata HOM05D002640 ORTHO05D003231 3.1e-27 125.2 99 61.6
BcaB05g24114 Brassica carinata HOM05D002640 ORTHO05D003231 4.1e-27 124.8 96 63.5
Ca_08696_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 6.9e-27 124.0 99 64.6
MBI18_g13239_MAGBIO Magnolia biondii HOM05D000013 ORTHO05D000011 9.1e-27 123.6 101 58.4
Medtr7g088700 Medicago truncatula HOM05D002640 ORTHO05D003231 1.2e-26 123.2 99 63.6
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea HOM05D002640 ORTHO05D003231 1.5e-26 122.9 99 63.6
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea HOM05D002640 ORTHO05D003231 1.5e-26 122.9 99 63.6
Lj9C650G10 Lonicera japonica HOM05D002640 ORTHO05D003231 2.0e-26 122.5 100 61.0
Carub.0002s0163 Capsella rubella HOM05D002640 ORTHO05D003231 3.4e-26 121.7 99 61.6
MBI19_g32644_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 1.3e-25 119.8 101 60.4
AT1G63210 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 3.8e-25 118.2 99 61.6
Glyma.03G121000 Glycine max HOM05D002640 ORTHO05D003231 3.8e-25 118.2 99 60.6
Glyma.19G125600 Glycine max HOM05D002640 ORTHO05D003231 3.8e-25 118.2 99 60.6
Lalb_Chr14g0365421 Lupinus albus HOM05D002640 ORTHO05D003231 6.5e-25 117.5 99 59.6
Phvul.001G117200 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 6.5e-25 117.5 99 59.6
Psat0s699g0040 Pisum sativum HOM05D002640 ORTHO05D003231 6.5e-25 117.5 99 60.6
Lalb_Chr24g0400581 Lupinus albus HOM05D002640 ORTHO05D003231 8.5e-25 117.1 99 59.6
VMungo1383G1765 Vigna mungo HOM05D002640 ORTHO05D003231 1.1e-24 116.7 99 59.6
AL2G12170 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 1.9e-24 115.9 99 58.6
Medtr7g087460 Medicago truncatula HOM05D002640 ORTHO05D003231 3.2e-24 115.2 100 63.0
Sp2g01330 Schrenkiella parvula HOM05D002640 ORTHO05D003231 3.2e-24 115.2 99 60.6
AUR62041298 Chenopodium quinoa HOM05D002640 ORTHO05D003231 5.5e-24 114.4 100 59.0
Lj1g0022797 Lotus japonicus HOM05D002640 ORTHO05D003231 7.9e-23 110.5 99 58.6
Zm00001eb291590 Zea mays HOM05D002640 ORTHO05D003231 1.0e-22 110.2 101 57.4
CDE08G1380 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 5.1e-22 107.8 95 54.7
ATR0782G064 Amborella trichopoda HOM05D002640 ORTHO05D003231 5.7e-21 104.4 99 55.6
Mapoly0025s0106 Marchantia polymorpha HOM05D002640 ORTHO05D003231 3.7e-20 101.7 99 53.5
SEGI_20723 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 1.1e-19 100.1 99 50.5
SEGI_00617 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 1.4e-19 99.8 99 50.5
SEGI_15393 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 6.9e-19 97.4 100 47.0
Glyma.06G312200 Glycine max HOM05D002640 ORTHO05D003231 2.0e-18 95.9 99 50.5
QL04p022175 Quercus lobata HOM05D002640 ORTHO05D003231 4.5e-18 94.7 99 52.5
Gohir.A05G396600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 8.5e-17 90.5 99 49.5
FvH4_1g02480 Fragaria vesca HOM05D002640 ORTHO05D003231 3.2e-16 88.6 101 53.5
Lalb_Chr15g0079261 Lupinus albus HOM05D002640 ORTHO05D003231 1.2e-15 86.7 99 47.5
SMO364G0195 Selaginella moellendorffii HOM05D002640 ORTHO05D003231 2.1e-15 85.9 99 44.4
AagrBONN_evm.TU.Sc2ySwM_228.4939 Anthoceros agrestis HOM05D002640 ORTHO05D003231 4.7e-15 84.7 103 44.7
FAN28G1503 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.4e-14 83.2 112 47.3
FAN19G1577 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.8e-14 82.8 101 51.5
VMungo1080G1740 Vigna mungo HOM05D002640 ORTHO05D003231 3.0e-14 82.0 99 45.5
Pp3c5_23930 Physcomitrium patens HOM05D002640 ORTHO05D003231 6.7e-14 80.9 105 43.8
Ca_12390_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 8.8e-14 80.5 99 46.5
Lj3g0013532 Lotus japonicus HOM05D002640 ORTHO05D003231 1.1e-13 80.1 99 45.5
FAN23G1577 Fragaria x ananassa HOM05D002640 ORTHO05D006510 3.3e-13 78.6 101 49.5
FAN23G2835 Fragaria x ananassa HOM05D002640 ORTHO05D003231 3.3e-13 78.6 101 49.5
Psat5g224720 Pisum sativum HOM05D002640 ORTHO05D003231 7.4e-13 77.4 99 44.4
Potri.001G034300 Populus trichocarpa HOM05D002640 ORTHO05D003231 7.4e-13 77.4 99 45.5
MBI02_g14198_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 9.7e-13 77.0 43 76.7
Actinidia18722 Actinidia chinensis HOM05D002640 ORTHO05D003231 1.3e-12 76.6 85 52.9
TPR.G30407 Trifolium pratense HOM05D002640 ORTHO05D003231 1.7e-12 76.3 99 44.4
Phvul.005G013600 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 3.7e-12 75.1 99 43.4
Thhalv10012314m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 1.1e-11 73.6 96 47.9
Carub.0001s4195 Capsella rubella HOM05D002640 ORTHO05D003231 4.1e-11 71.6 100 48.0
CBR_g879 Chara braunii HOM05D002640 ORTHO05D003231 5.3e-11 71.2 101 46.5
Psat3g019400 Pisum sativum HOM05D002640 ORTHO05D003231 7.2e-08 60.8 106 41.5
RcHm_v2.0_Chr6g0275851 Rosa chinensis HOM05D002640 ORTHO05D003231 4.0e-06 55.1 57 49.1


User provided reference genes

Program Settings