Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1109 Erigeron canadensis HOM05D002640 ORTHO05D003231 8.9e-50 199.9 97 100.0
ECA236G4010 Erigeron canadensis HOM05D002640 ORTHO05D003231 6.4e-40 167.2 96 82.3
HanXRQChr06g0177131 Helianthus annuus HOM05D002640 ORTHO05D003231 1.1e-28 129.8 107 59.8
Lsat_1_v5_gn_8_83860 Lactuca sativa HOM05D002640 ORTHO05D003231 5.6e-28 127.5 113 54.9
Rhsim04G0118000 Rhododendron simsii HOM05D002640 ORTHO05D003231 7.6e-25 117.1 115 51.3
HanXRQChr04g0125591 Helianthus annuus HOM05D002640 ORTHO05D003231 1.3e-24 116.3 106 57.5
Lsat_1_v5_gn_4_43821 Lactuca sativa HOM05D002640 ORTHO05D003231 6.4e-24 114.0 110 50.0
Dinv10811 Davidia involucrata HOM05D002640 ORTHO05D003231 8.4e-24 113.6 115 49.6
Cc06_g21410 Coffea canephora HOM05D002640 ORTHO05D003231 1.4e-23 112.8 115 50.4
Lj2C412G3 Lonicera japonica HOM05D002640 ORTHO05D003231 1.4e-23 112.8 115 49.6
TPR.G25549 Trifolium pratense HOM05D002640 ORTHO05D003231 2.4e-23 112.1 113 48.7
ECA247G4078 Erigeron canadensis HOM05D002640 ORTHO05D003231 3.2e-23 111.7 109 52.3
Phvul.001G117200 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 3.2e-23 111.7 115 50.4
HanXRQChr10g0298481 Helianthus annuus HOM05D002640 ORTHO05D003231 9.3e-23 110.2 110 51.8
Ciclev10013566m.g Citrus clementina HOM05D002640 ORTHO05D003231 1.2e-22 109.8 115 47.0
vmacro08975 Vaccinium macrocarpon HOM05D002640 ORTHO05D003231 3.5e-22 108.2 115 49.6
GSVIVG01025815001 Vitis vinifera HOM05D002640 ORTHO05D003231 3.5e-22 108.2 113 47.8
CSS0028254 Camellia sinensis var. sinensis HOM05D002640 ORTHO05D003231 4.6e-22 107.8 116 50.0
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea HOM05D002640 ORTHO05D003231 6.0e-22 107.5 116 46.6
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea HOM05D002640 ORTHO05D003231 6.0e-22 107.5 116 46.6
Gohir.A10G191700 Gossypium hirsutum HOM05D002640 ORTHO05D003231 7.9e-22 107.1 107 46.7
Psat0s699g0040 Pisum sativum HOM05D002640 ORTHO05D003231 7.9e-22 107.1 116 47.4
Thecc.10G133700 Theobroma cacao HOM05D002640 ORTHO05D003231 7.9e-22 107.1 108 46.3
Dinv13155 Davidia involucrata HOM05D002640 ORTHO05D003231 1.0e-21 106.7 115 47.0
Gohir.D06G181500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.0e-21 106.7 108 50.0
Glyma.19G125600 Glycine max HOM05D002640 ORTHO05D003231 1.3e-21 106.3 116 46.6
VMungo1383G1765 Vigna mungo HOM05D002640 ORTHO05D003231 1.3e-21 106.3 115 48.7
CsaV3_2G009910 Cucumis sativus L. HOM05D002640 ORTHO05D003231 1.8e-21 105.9 108 47.2
Glyma.03G121000 Glycine max HOM05D002640 ORTHO05D003231 1.8e-21 105.9 116 45.7
Gohir.A06G172600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.8e-21 105.9 108 49.1
Gorai.010G212900 Gossypium raimondii HOM05D002640 ORTHO05D003231 1.8e-21 105.9 108 49.1
Manes.08G162401 Manihot esculenta HOM05D002640 ORTHO05D003231 1.8e-21 105.9 115 49.6
Gohir.D10G199500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 2.3e-21 105.5 107 45.8
Gorai.011G223600 Gossypium raimondii HOM05D002640 ORTHO05D003231 2.3e-21 105.5 107 45.8
Lsat_1_v5_gn_9_32200 Lactuca sativa HOM05D002640 ORTHO05D003231 2.3e-21 105.5 116 47.4
Dinv13151 Davidia involucrata HOM05D002640 ORTHO05D003231 3.0e-21 105.1 115 47.0
Actinidia38202 Actinidia chinensis HOM05D002640 ORTHO05D003231 3.9e-21 104.8 115 47.0
Prupe.7G019900 Prunus persica HOM05D002640 ORTHO05D003231 5.1e-21 104.4 108 46.3
ClCG11G010450 Citrullus lanatus HOM05D002640 ORTHO05D003231 6.7e-21 104.0 108 45.4
Nn7g37023 Nelumbo nucifera HOM05D002640 ORTHO05D003231 6.7e-21 104.0 116 45.7
Sabra06G0021300 Salix brachista HOM05D002640 ORTHO05D003231 6.7e-21 104.0 105 47.6
Lalb_Chr14g0365421 Lupinus albus HOM05D002640 ORTHO05D003231 1.1e-20 103.2 115 47.8
A07p32820 Brassica napus HOM05D002640 ORTHO05D003231 1.5e-20 102.8 110 47.3
BraA07t30909Z Brassica rapa HOM05D002640 ORTHO05D003231 1.5e-20 102.8 110 47.3
Sabra16G0033200 Salix brachista HOM05D002640 ORTHO05D003231 1.9e-20 102.4 105 46.7
THA.LOC104805690 Tarenaya hassleriana HOM05D002640 ORTHO05D003231 2.5e-20 102.1 111 45.0
Cpa.g.sc1617.1 Carica papaya HOM05D002640 ORTHO05D003231 3.3e-20 101.7 112 47.3
Lj1C1081G2 Lonicera japonica HOM05D002640 ORTHO05D003231 3.3e-20 101.7 120 45.8
Haze_20287 Corylus avellana HOM05D002640 ORTHO05D003231 4.3e-20 101.3 115 43.5
Potri.006G031900 Populus trichocarpa HOM05D002640 ORTHO05D003231 4.3e-20 101.3 105 47.6
Potri.016G029200 Populus trichocarpa HOM05D002640 ORTHO05D003231 4.3e-20 101.3 105 45.7
Actinidia37853 Actinidia chinensis HOM05D002640 ORTHO05D003231 5.6e-20 100.9 115 44.3
Lalb_Chr24g0400581 Lupinus albus HOM05D002640 ORTHO05D003231 5.6e-20 100.9 116 49.1
Sed0027584 Sechium edule HOM05D002640 ORTHO05D003231 1.3e-19 99.8 108 46.3
QL07p013828 Quercus lobata HOM05D002640 ORTHO05D003231 1.6e-19 99.4 115 45.2
RcHm_v2.0_Chr3g0494601 Rosa chinensis HOM05D002640 ORTHO05D003231 1.6e-19 99.4 107 46.7
C02p17450 Brassica napus HOM05D002640 ORTHO05D003231 2.1e-19 99.0 109 46.8
BolC2t07860H Brassica oleracea HOM05D002640 ORTHO05D003231 2.1e-19 99.0 109 46.8
Duzib106G1211 Durio zibethinus HOM05D002640 ORTHO05D003231 2.1e-19 99.0 108 46.3
TWI77G0284 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 2.1e-19 99.0 110 47.3
A02p13220 Brassica napus HOM05D002640 ORTHO05D003231 2.8e-19 98.6 109 46.8
C06p39050 Brassica napus HOM05D002640 ORTHO05D003231 2.8e-19 98.6 110 46.4
BolC6t38997H Brassica oleracea HOM05D002640 ORTHO05D003231 2.8e-19 98.6 110 46.4
BraA02t06378Z Brassica rapa HOM05D002640 ORTHO05D003231 2.8e-19 98.6 109 46.8
Ca_08696_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 3.7e-19 98.2 113 45.1
Duzib114G0695 Durio zibethinus HOM05D002640 ORTHO05D003231 4.8e-19 97.8 108 47.2
Thhalv10012314m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 4.8e-19 97.8 110 45.5
Thhalv10018001m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 6.2e-19 97.4 111 45.0
CiPaw.09G052100 Carya illinoinensis HOM05D002640 ORTHO05D003231 8.2e-19 97.1 116 43.1
AL2G22130 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 1.1e-18 96.7 107 45.8
CANSAT64G1505 Cannabis sativa HOM05D002640 ORTHO05D003231 1.1e-18 96.7 108 44.4
Oeu022996.1 Olea europaea HOM05D002640 ORTHO05D003231 1.1e-18 96.7 114 47.4
Oeu044234.2 Olea europaea HOM05D002640 ORTHO05D003231 1.1e-18 96.7 114 46.5
Lj1g0022797 Lotus japonicus HOM05D002640 ORTHO05D003231 1.4e-18 96.3 115 44.3
Sp5g20200 Schrenkiella parvula HOM05D002640 ORTHO05D003231 1.4e-18 96.3 109 45.0
Atru.chr1.1380 Acer truncatum HOM05D002640 ORTHO05D003231 1.8e-18 95.9 115 41.7
Carub.0002s1117 Capsella rubella HOM05D002640 ORTHO05D003231 1.8e-18 95.9 111 45.9
CAN.G128.94 Capsicum annuum HOM05D002640 ORTHO05D003231 1.8e-18 95.9 115 43.5
MD10G1173400 Malus domestica HOM05D002640 ORTHO05D003231 2.4e-18 95.5 108 43.5
TWI53G2001 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 2.4e-18 95.5 110 47.3
AT1G65440 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 5.3e-18 94.4 107 45.8
Medtr7g088700 Medicago truncatula HOM05D002640 ORTHO05D003231 5.3e-18 94.4 115 44.3
PGSC0003DMG400028197 Solanum tuberosum HOM05D002640 ORTHO05D003231 6.9e-18 94.0 119 43.7
MSTRG.6300 Avicennia marina HOM05D002640 ORTHO05D003231 1.2e-17 93.2 111 46.8
CARHR057100 Cardamine hirsuta HOM05D002640 ORTHO05D003231 2.0e-17 92.4 111 44.1
COL.COLO4_10242 Corchorus olitorius HOM05D002640 ORTHO05D003231 2.0e-17 92.4 127 37.8
EL10Ac3g07304 Beta vulgaris HOM05D002640 ORTHO05D003231 2.6e-17 92.0 106 48.1
FAN19G2288 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.6e-17 92.0 107 43.9
Medtr7g087460 Medicago truncatula HOM05D002640 ORTHO05D003231 3.4e-17 91.7 116 43.1
FAN28G1238 Fragaria x ananassa HOM05D002640 ORTHO05D003231 4.5e-17 91.3 107 43.9
TAR623G0852 Trochodendron aralioides HOM05D002640 ORTHO05D003231 4.5e-17 91.3 117 39.3
unitig_21.g20682 Utricularia gibba HOM05D002640 ORTHO05D003231 4.5e-17 91.3 111 45.0
FvH4_1g29220 Fragaria vesca HOM05D002640 ORTHO05D003231 5.8e-17 90.9 107 43.9
MD00G1108000 Malus domestica HOM05D002640 ORTHO05D003231 5.8e-17 90.9 108 39.8
Carub.0002s0163 Capsella rubella HOM05D002640 ORTHO05D003231 7.6e-17 90.5 100 45.0
SGA_v2.0_scaffold66G22308 Striga asiatica HOM05D002640 ORTHO05D003231 7.6e-17 90.5 108 48.1
Aqoxy1G00051 Aquilegia oxysepala HOM05D002640 ORTHO05D003231 1.0e-16 90.1 113 44.2
QL07p013799 Quercus lobata HOM05D002640 ORTHO05D003231 1.0e-16 90.1 115 42.6
Ca_12390_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 1.3e-16 89.7 111 41.4
FAN23G1939 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.3e-16 89.7 106 43.4
Psat5g224720 Pisum sativum HOM05D002640 ORTHO05D003231 1.3e-16 89.7 111 41.4
Nitab4.5_0000062g0270 Nicotiana tabacum HOM05D002640 ORTHO05D003231 2.2e-16 89.0 117 43.6
Solyc10g081020.2 Solanum lycopersicum HOM05D002640 ORTHO05D003231 2.2e-16 89.0 116 44.8
Nitab4.5_0003225g0040 Nicotiana tabacum HOM05D002640 ORTHO05D003231 2.9e-16 88.6 117 43.6
Lalb_Chr15g0079261 Lupinus albus HOM05D002640 ORTHO05D003231 3.8e-16 88.2 110 40.0
Peaxi162Scf00601g00007 Petunia axillaris HOM05D002640 ORTHO05D003231 3.8e-16 88.2 118 42.4
Sc19g0007910 Simmondsia chinensis HOM05D002640 ORTHO05D003231 3.8e-16 88.2 106 39.6
Aa31LG2G2460 Aethionema arabicum HOM05D002640 ORTHO05D003231 4.9e-16 87.8 111 41.4
FAN26G3239 Fragaria x ananassa HOM05D002640 ORTHO05D003231 4.9e-16 87.8 107 42.1
Sopen10g031530 Solanum pennellii HOM05D002640 ORTHO05D003231 6.5e-16 87.4 116 44.0
AL2G12170 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 1.4e-15 86.3 99 45.5
Gohir.A12G078700 Gossypium hirsutum HOM05D002640 ORTHO05D020789 1.4e-15 86.3 118 39.8
AT1G63210 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 2.5e-15 85.5 100 43.0
Hund19066 Selenicereus undatus HOM05D002640 ORTHO05D003231 3.2e-15 85.1 110 41.8
Eucgr.K01682 Eucalyptus grandis HOM05D002640 ORTHO05D003231 5.5e-15 84.3 96 43.8
AUR62018416 Chenopodium quinoa HOM05D002640 ORTHO05D003231 9.3e-15 83.6 106 41.5
Hund00908 Selenicereus undatus HOM05D002640 ORTHO05D003231 9.3e-15 83.6 109 42.2
TPR.G30407 Trifolium pratense HOM05D002640 ORTHO05D003231 9.3e-15 83.6 111 39.6
Gohir.A05G396600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.6e-14 82.8 118 39.0
Prupe.8G211800 Prunus persica HOM05D002640 ORTHO05D003231 1.6e-14 82.8 107 43.0
Hund08680 Selenicereus undatus HOM05D002640 ORTHO05D003231 2.1e-14 82.4 108 41.7
QL04p022175 Quercus lobata HOM05D002640 ORTHO05D003231 3.5e-14 81.6 114 36.8
GSVIVG01012377001 Vitis vinifera HOM05D002640 ORTHO05D003231 4.6e-14 81.3 110 43.6
PSO339G4261 Papaver somniferum HOM05D002640 ORTHO05D003231 7.9e-14 80.5 117 35.0
AUR62041298 Chenopodium quinoa HOM05D002640 ORTHO05D003231 1.0e-13 80.1 106 40.6
Glyma.06G312200 Glycine max HOM05D002640 ORTHO05D003231 1.0e-13 80.1 110 39.1
QL04p022161 Quercus lobata HOM05D002640 ORTHO05D003231 1.3e-13 79.7 121 38.8
PSO384G3455 Papaver somniferum HOM05D002640 ORTHO05D003231 1.8e-13 79.3 117 34.2
Lj3g0013532 Lotus japonicus HOM05D002640 ORTHO05D003231 3.0e-13 78.6 111 38.7
MBI13_g02373_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 3.0e-13 78.6 108 37.0
Potri.001G034300 Populus trichocarpa HOM05D002640 ORTHO05D003231 6.7e-13 77.4 114 38.6
Ah.04g150530 Amaranthus hybridus HOM05D002640 ORTHO05D003231 8.7e-13 77.0 106 41.5
HPP92_011268 Vanilla planifolia HOM05D002640 ORTHO05D003231 8.7e-13 77.0 108 38.9
HPP92_011291 Vanilla planifolia HOM05D002640 ORTHO05D003231 8.7e-13 77.0 108 38.9
SHI11341 Sapria himalayana HOM05D002640 ORTHO05D003231 1.1e-12 76.6 103 35.9
Actinidia15138 Actinidia chinensis HOM05D002640 ORTHO05D003231 1.9e-12 75.9 61 54.1
BcaB05g24114 Brassica carinata HOM05D002640 ORTHO05D003231 3.3e-12 75.1 95 43.2
Actinidia15141 Actinidia chinensis HOM05D002640 ORTHO05D003231 4.3e-12 74.7 61 54.1
ATR0782G064 Amborella trichopoda HOM05D002640 ORTHO05D003231 5.7e-12 74.3 113 36.3
Lj9C650G10 Lonicera japonica HOM05D002640 ORTHO05D003231 9.7e-12 73.6 97 40.2
Gohir.A11G197584 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.6e-11 72.8 103 39.8
Migut.J01544 Erythranthe guttata HOM05D002640 ORTHO05D003231 2.2e-11 72.4 111 41.4
Migut.J01553 Erythranthe guttata HOM05D002640 ORTHO05D003231 2.2e-11 72.4 111 39.6
Glyma.04G126400 Glycine max HOM05D002640 ORTHO05D003231 2.2e-11 72.4 108 37.0
Zm00001eb291590 Zea mays HOM05D002640 ORTHO05D003231 2.8e-11 72.0 108 35.2
VMungo1080G1740 Vigna mungo HOM05D002640 ORTHO05D003231 3.7e-11 71.6 106 39.6
CDE08G0416 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 8.2e-11 70.5 127 33.1
PGR142G0829 Punica granatum HOM05D002640 ORTHO05D003231 1.4e-10 69.7 101 40.6
RcHm_v2.0_Chr6g0275851 Rosa chinensis HOM05D002640 ORTHO05D003231 2.4e-10 68.9 99 38.4
Actinidia18716 Actinidia chinensis HOM05D002640 ORTHO05D003231 4.1e-10 68.2 97 40.2
Gohir.A10G108316 Gossypium hirsutum HOM05D036187 ORTHO05D020789 4.1e-10 68.2 84 44.0
CDE09G1137 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 5.3e-10 67.8 125 32.8
MELO3C008653.2 Cucumis melo HOM05D002640 ORTHO05D003231 5.3e-10 67.8 96 39.6
DCAR_020604 Daucus carota HOM05D002640 ORTHO05D003231 2.6e-09 65.5 44 59.1
SalBow6G2030 Salvia bowleyana HOM05D002640 ORTHO05D003231 2.6e-09 65.5 96 40.6
Phvul.005G013600 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 3.4e-09 65.1 110 37.3
Gohir.A11G138500 Gossypium hirsutum HOM05D002640 ORTHO05D020789 7.6e-09 63.9 63 47.6
Carub.0001s4195 Capsella rubella HOM05D002640 ORTHO05D003231 1.3e-08 63.2 90 41.1
SEGI_00617 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 1.7e-08 62.8 111 35.1
SEGI_20723 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 1.7e-08 62.8 111 36.0
FAN26G2883 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.2e-08 62.4 84 42.9
FAN28G1503 Fragaria x ananassa HOM05D002640 ORTHO05D003231 6.5e-08 60.8 65 44.6
FvH4_1g02810 Fragaria vesca HOM05D002640 ORTHO05D003231 4.2e-07 58.2 85 38.8
FAN19G3161 Fragaria x ananassa HOM05D002640 ORTHO05D003231 5.5e-07 57.8 85 38.8
RcHm_v2.0_Chr2g0087931 Rosa chinensis HOM05D002640 ORTHO05D003231 5.5e-07 57.8 75 40.0
RcHm_v2.0_Chr2g0087911 Rosa chinensis HOM05D002640 ORTHO05D003231 2.1e-06 55.8 51 47.1


User provided reference genes

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