Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G388.7 Capsicum annuum HOM05D000113 ORTHO05D021107 1.4e-161 572.8 275 100.0
CAN.G905.7 Capsicum annuum HOM05D000113 ORTHO05D005496 3.2e-113 412.1 301 69.1
PGSC0003DMG400016218 Solanum tuberosum HOM05D000113 ORTHO05D005496 7.5e-102 374.4 293 65.5
Sopen11g005090 Solanum pennellii HOM05D000113 ORTHO05D005496 2.9e-101 372.5 293 64.8
Solyc11g010310.2 Solanum lycopersicum HOM05D000113 ORTHO05D005496 6.3e-101 371.3 293 64.8
Nitab4.5_0005930g0010 Nicotiana tabacum HOM05D000113 ORTHO05D005496 4.3e-97 358.6 302 60.6
Nitab4.5_0000241g0130 Nicotiana tabacum HOM05D000113 ORTHO05D005496 7.3e-97 357.8 302 60.9
PGSC0003DMG402016146 Solanum tuberosum HOM05D000113 ORTHO05D005496 3.1e-95 352.4 274 65.0
Peaxi162Scf00237g01219 Petunia axillaris HOM05D000113 ORTHO05D005496 9.8e-94 347.4 302 59.3
Solyc04g014210.3 Solanum lycopersicum HOM05D000113 ORTHO05D005496 9.5e-89 330.9 293 57.7
Peaxi162Scf00569g00315 Petunia axillaris HOM05D000113 ORTHO05D005496 2.1e-88 329.7 294 58.8
Sopen04g006310 Solanum pennellii HOM05D000113 ORTHO05D005496 6.2e-88 328.2 293 57.3
PGSC0003DMG400023635 Solanum tuberosum HOM05D000113 ORTHO05D005496 3.1e-87 325.9 293 57.3
CAN.G525.46 Capsicum annuum HOM05D000113 ORTHO05D005496 4.0e-87 325.5 293 58.0
Nitab4.5_0002334g0050 Nicotiana tabacum HOM05D000113 ORTHO05D005496 2.9e-85 319.3 294 56.5
CSS0032056 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005496 3.2e-76 289.3 302 49.0
CAN.G1546.5 Capsicum annuum HOM05D000113 ORTHO05D021107 5.4e-76 288.5 205 70.2
Dinv08866 Davidia involucrata HOM05D000113 ORTHO05D005496 1.2e-75 287.3 302 50.3
Actinidia06536 Actinidia chinensis HOM05D000113 ORTHO05D005496 7.8e-75 284.6 302 48.7
Lj2C539T3 Lonicera japonica HOM05D000113 ORTHO05D005496 7.8e-75 284.6 283 49.8
CAN.G1463.6 Capsicum annuum HOM05D000113 ORTHO05D021107 1.0e-74 284.3 233 65.2
Cc07_g14540 Coffea canephora HOM05D000113 ORTHO05D005496 3.9e-74 282.3 302 48.3
CiPaw.03G146200 Carya illinoinensis HOM05D000113 ORTHO05D005496 6.2e-72 275.0 294 48.3
Gohir.A10G087100 Gossypium hirsutum HOM05D000113 ORTHO05D005496 1.1e-71 274.2 302 47.4
COL.COLO4_27299 Corchorus olitorius HOM05D000113 ORTHO05D005496 1.8e-71 273.5 302 46.7
Gohir.D10G101300 Gossypium hirsutum HOM05D000113 ORTHO05D005496 3.1e-71 272.7 302 47.0
Gorai.011G111000 Gossypium raimondii HOM05D000113 ORTHO05D005496 3.1e-71 272.7 302 47.0
Duzib264G0979 Durio zibethinus HOM05D000113 ORTHO05D005496 5.2e-71 271.9 302 46.7
MSTRG.2587 Avicennia marina HOM05D000113 ORTHO05D005496 2.6e-70 269.6 302 44.7
QL06p047959 Quercus lobata HOM05D000113 ORTHO05D005496 3.4e-70 269.2 302 45.7
CiPaw.04G104000 Carya illinoinensis HOM05D000113 ORTHO05D005496 4.4e-70 268.9 302 45.4
MD01G1036600 Malus domestica HOM05D000113 ORTHO05D005496 4.4e-70 268.9 302 45.7
Duzib147G1158 Durio zibethinus HOM05D000113 ORTHO05D005496 7.6e-70 268.1 302 46.4
Cpa.g.sc55.67 Carica papaya HOM05D000113 ORTHO05D005496 1.3e-69 267.3 302 45.7
Potri.005G071500 Populus trichocarpa HOM05D000113 ORTHO05D005496 1.7e-69 266.9 302 45.4
CAN.G960.13 Capsicum annuum HOM05D000113 ORTHO05D021107 4.9e-69 265.4 210 62.9
Ciclev10024688m.g Citrus clementina HOM05D000113 ORTHO05D005496 1.1e-68 264.2 302 45.0
Sabra05G0058500 Salix brachista HOM05D000113 ORTHO05D005496 1.1e-68 264.2 302 45.0
Prupe.6G193800 Prunus persica HOM05D000113 ORTHO05D005496 1.4e-68 263.8 302 44.4
Actinidia00284 Actinidia chinensis HOM05D000113 ORTHO05D005496 2.4e-68 263.1 305 46.6
RcHm_v2.0_Chr2g0112281 Rosa chinensis HOM05D000113 ORTHO05D005496 3.2e-68 262.7 302 43.7
Hund14100 Selenicereus undatus HOM05D000113 ORTHO05D005496 3.2e-68 262.7 303 44.9
DCAR_014198 Daucus carota HOM05D000113 ORTHO05D005496 3.5e-67 259.2 301 46.2
VMungo1383G1146 Vigna mungo HOM05D000113 ORTHO05D005496 4.6e-67 258.8 303 44.2
Dinv09001 Davidia involucrata HOM05D000113 ORTHO05D005496 7.8e-67 258.1 305 46.2
Phvul.001G254100 Phaseolus vulgaris HOM05D000113 ORTHO05D005496 1.7e-66 256.9 303 44.6
AUR62027200 Chenopodium quinoa HOM05D000113 ORTHO05D005496 2.3e-66 256.5 303 45.2
Haze_24824 Corylus avellana HOM05D000113 ORTHO05D005496 3.9e-66 255.8 302 44.0
Haze_24829 Corylus avellana HOM05D000113 ORTHO05D005496 3.9e-66 255.8 302 44.0
TAR628G1021 Trochodendron aralioides HOM05D000113 ORTHO05D005496 3.9e-66 255.8 305 44.3
Atru.chr3.1339 Acer truncatum HOM05D000113 ORTHO05D005496 6.6e-66 255.0 305 43.3
FvH4_1g20200 Fragaria vesca HOM05D000113 ORTHO05D005496 6.6e-66 255.0 303 42.9
FAN19G2146 Fragaria x ananassa HOM05D000113 ORTHO05D005496 8.7e-66 254.6 303 42.9
FAN28G1056 Fragaria x ananassa HOM05D000113 ORTHO05D005496 8.7e-66 254.6 303 42.2
SGA_v2.0_scaffold421G51436 Striga asiatica HOM05D000113 ORTHO05D005496 8.7e-66 254.6 292 43.5
FAN26G3479 Fragaria x ananassa HOM05D000113 ORTHO05D005496 1.1e-65 254.2 303 42.2
FAN23G0752 Fragaria x ananassa HOM05D000113 ORTHO05D005496 1.5e-65 253.8 303 42.2
Nn5g29984 Nelumbo nucifera HOM05D000113 ORTHO05D005496 1.9e-65 253.4 305 43.9
arahy.Tifrunner.gnm1.ann1.FHUE8B Arachis hypogaea HOM05D000113 ORTHO05D005496 2.5e-65 253.1 302 44.0
Dinv24167 Davidia involucrata HOM05D000113 ORTHO05D005496 3.3e-65 252.7 305 44.6
Migut.H02323 Erythranthe guttata HOM05D000113 ORTHO05D005496 3.3e-65 252.7 300 44.3
Glyma.18G014800 Glycine max HOM05D000113 ORTHO05D005496 3.3e-65 252.7 302 42.7
Cfa002587 Carpinus fangiana HOM05D000113 ORTHO05D005496 4.3e-65 252.3 302 43.0
Rhsim10G0168800 Rhododendron simsii HOM05D000113 ORTHO05D005496 5.6e-65 251.9 306 43.8
MBI02_g10702_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005496 7.3e-65 251.5 304 41.8
Lj6g0026739 Lotus japonicus HOM05D000113 ORTHO05D005496 9.6e-65 251.1 302 43.4
Medtr3g086770 Medicago truncatula HOM05D000113 ORTHO05D005496 1.3e-64 250.8 302 42.7
arahy.Tifrunner.gnm1.ann1.KS9FMV Arachis hypogaea HOM05D000113 ORTHO05D005496 2.1e-64 250.0 302 43.7
Eucgr.H04740 Eucalyptus grandis HOM05D000113 ORTHO05D005496 2.1e-64 250.0 307 41.7
CSS0007444 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005496 2.8e-64 249.6 308 43.8
CSS0032648 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005496 2.8e-64 249.6 308 43.8
Sc03g0000190 Simmondsia chinensis HOM05D000113 ORTHO05D005496 2.8e-64 249.6 302 43.0
CANSAT01G0367 Cannabis sativa HOM05D000113 ORTHO05D005496 3.6e-64 249.2 303 42.9
Gorai.003G041600 Gossypium raimondii HOM05D000113 ORTHO05D005496 4.8e-64 248.8 302 44.0
Lj5g0010678 Lotus japonicus HOM05D000113 ORTHO05D005496 6.2e-64 248.4 302 42.7
Glyma.11G242300 Glycine max HOM05D000113 ORTHO05D005496 8.1e-64 248.1 302 42.1
Nn5g29734 Nelumbo nucifera HOM05D000113 ORTHO05D005496 8.1e-64 248.1 305 43.0
AUR62003267 Chenopodium quinoa HOM05D000113 ORTHO05D005496 1.1e-63 247.7 303 43.9
PGR102G0466 Punica granatum HOM05D000113 ORTHO05D005496 1.1e-63 247.7 299 42.8
Zm00001eb327760 Zea mays HOM05D000113 ORTHO05D005496 1.1e-63 247.7 301 40.9
Aqoxy4G02794 Aquilegia oxysepala HOM05D000113 ORTHO05D005496 1.8e-63 246.9 298 41.6
CAN.G1546.4 Capsicum annuum HOM05D000113 ORTHO05D021107 1.8e-63 246.9 201 63.2
Gohir.A02G129900 Gossypium hirsutum HOM05D000113 ORTHO05D005496 1.8e-63 246.9 302 43.7
SGA_v2.0_scaffold108G30899 Striga asiatica HOM05D000113 ORTHO05D005496 1.8e-63 246.9 297 42.1
Os07g0621500 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D005496 2.4e-63 246.5 306 40.5
PSO761G0046 Papaver somniferum HOM05D000113 ORTHO05D005496 5.3e-63 245.4 304 39.5
Lsat_1_v5_gn_5_44701 Lactuca sativa HOM05D000113 ORTHO05D005496 6.9e-63 245.0 301 40.5
PSO700G0222 Papaver somniferum HOM05D000113 ORTHO05D005496 6.9e-63 245.0 304 39.5
MBI06_g03318_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005496 9.0e-63 244.6 306 42.8
Ca_16506_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005496 1.2e-62 244.2 302 41.7
Ca_30638_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005496 1.2e-62 244.2 302 41.7
Gohir.D03G040800 Gossypium hirsutum HOM05D000113 ORTHO05D005496 1.5e-62 243.8 302 43.7
Psat1g084000 Pisum sativum HOM05D000113 ORTHO05D005496 2.6e-62 243.0 302 41.7
TPR.G30542 Trifolium pratense HOM05D000113 ORTHO05D005496 2.6e-62 243.0 302 41.1
ClCG10G008390 Citrullus lanatus HOM05D000113 ORTHO05D005496 4.4e-62 242.3 303 42.2
MELO3C018998.2 Cucumis melo HOM05D000113 ORTHO05D005496 4.4e-62 242.3 303 42.6
ECA246G2046 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.6e-62 241.5 305 42.3
Manes.10G103500 Manihot esculenta HOM05D000113 ORTHO05D005496 7.6e-62 241.5 305 41.6
Lalb_Chr23g0277561 Lupinus albus HOM05D000113 ORTHO05D005496 1.3e-61 240.7 302 40.7
CSS0007191 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005496 2.9e-61 239.6 285 45.6
Lalb_Chr08g0230951 Lupinus albus HOM05D000113 ORTHO05D005496 2.9e-61 239.6 304 41.8
CsaV3_4G009030 Cucumis sativus L. HOM05D000113 ORTHO05D005496 3.8e-61 239.2 303 41.6
TWI77G0223 Tripterygium wilfordii HOM05D000113 ORTHO05D005496 3.8e-61 239.2 302 42.1
Ah.02g126230 Amaranthus hybridus HOM05D000113 ORTHO05D005496 4.9e-61 238.8 303 41.6
EL10Ac6g14815 Beta vulgaris HOM05D000113 ORTHO05D005496 4.9e-61 238.8 303 40.9
Sabra17G0036700 Salix brachista HOM05D000113 ORTHO05D005496 8.4e-61 238.0 305 43.9
Sabra17G0042100 Salix brachista HOM05D000113 ORTHO05D005496 8.4e-61 238.0 305 43.9
Sed0023847 Sechium edule HOM05D000113 ORTHO05D005496 8.4e-61 238.0 304 43.1
Potri.017G050100 Populus trichocarpa HOM05D000113 ORTHO05D005496 1.2e-59 234.2 305 43.6
TPR.G1396 Trifolium pratense HOM05D000113 ORTHO05D005496 1.2e-59 234.2 302 41.4
HanXRQChr15g0469421 Helianthus annuus HOM05D000113 ORTHO05D005496 2.1e-59 233.4 305 40.7
CDE10G0712 Ceratophyllum demersum HOM05D000113 ORTHO05D005496 7.9e-59 231.5 297 40.7
THA.LOC104798664 Tarenaya hassleriana HOM05D000113 ORTHO05D005496 1.0e-58 231.1 303 40.3
HPP92_010964 Vanilla planifolia HOM05D000113 ORTHO05D005496 1.7e-58 230.3 296 39.5
SalBow1G6336 Salvia bowleyana HOM05D000113 ORTHO05D005496 6.6e-58 228.4 302 39.7
CAN.G960.12 Capsicum annuum HOM05D005332 ORTHO05D006861 3.3e-57 226.1 203 60.6
Medtr3g014030 Medicago truncatula HOM05D000113 ORTHO05D005496 4.3e-57 225.7 302 39.4
AL6G20870 Arabidopsis lyrata HOM05D000113 ORTHO05D005496 1.3e-56 224.2 295 38.6
BcaB01g05540 Brassica carinata HOM05D000113 ORTHO05D005496 1.3e-56 224.2 303 38.3
Medtr1g037750 Medicago truncatula HOM05D000113 ORTHO05D005496 1.3e-56 224.2 302 39.1
A03p04500 Brassica napus HOM05D000113 ORTHO05D005496 2.8e-56 223.0 303 38.0
C03p05000 Brassica napus HOM05D000113 ORTHO05D005496 2.8e-56 223.0 303 38.0
BolC3t13030H Brassica oleracea HOM05D000113 ORTHO05D005496 2.8e-56 223.0 303 38.0
BraA03t09794Z Brassica rapa HOM05D000113 ORTHO05D005496 2.8e-56 223.0 303 38.0
Aa31LG3G16810 Aethionema arabicum HOM05D000113 ORTHO05D005496 4.0e-55 219.2 295 39.7
AT5G10370 Arabidopsis thaliana HOM05D000113 ORTHO05D005496 9.0e-55 218.0 303 37.6
AT4G01020 Arabidopsis thaliana HOM05D000113 ORTHO05D005496 1.5e-54 217.2 303 37.6
Carub.0006s0884 Capsella rubella HOM05D000113 ORTHO05D005496 4.5e-54 215.7 295 37.3
Sp6g33080 Schrenkiella parvula HOM05D000113 ORTHO05D005496 1.3e-53 214.2 303 37.3
BcaB08g37113 Brassica carinata HOM05D000113 ORTHO05D005496 1.1e-52 211.1 303 37.3
Thhalv10012419m.g Eutrema salsugineum HOM05D000113 ORTHO05D005496 3.2e-52 209.5 298 37.6
C09p67040 Brassica napus HOM05D000113 ORTHO05D005496 7.1e-52 208.4 306 37.6
A10p27230 Brassica napus HOM05D000113 ORTHO05D005496 9.3e-52 208.0 307 38.1
CARHR202930 Cardamine hirsuta HOM05D000113 ORTHO05D005496 9.3e-52 208.0 295 36.6
BolC9t59477H Brassica oleracea HOM05D000113 ORTHO05D005496 3.5e-51 206.1 306 37.3
BcaC04g19309 Brassica carinata HOM05D000113 ORTHO05D005496 1.0e-50 204.5 306 37.3
vmacro12989 Vaccinium macrocarpon HOM05D000113 ORTHO05D005496 1.0e-50 204.5 303 40.9
BraA10t44773Z Brassica rapa HOM05D000113 ORTHO05D005496 3.9e-50 202.6 302 36.8
ATR0807G003 Amborella trichopoda HOM05D000113 ORTHO05D005496 4.3e-49 199.1 301 36.2
SEGI_02546 Sequoiadendron giganteum HOM05D000113 ORTHO05D005496 1.3e-48 197.6 299 35.1
unitig_899.g14557 Utricularia gibba HOM05D000113 ORTHO05D005496 1.1e-47 194.5 273 39.2
Nitab4.5_0005401g0050 Nicotiana tabacum HOM05D000113 ORTHO05D005496 1.4e-47 194.1 205 53.2
BcaB06g26892 Brassica carinata HOM05D000113 ORTHO05D005496 2.4e-47 193.4 278 37.8
BcaB06g26902 Brassica carinata HOM05D000113 ORTHO05D005496 2.4e-47 193.4 278 38.1
Oeu008640.1 Olea europaea HOM05D000113 ORTHO05D005496 2.6e-46 189.9 174 51.7
Sed0005908 Sechium edule HOM05D000113 ORTHO05D005496 5.9e-38 162.2 178 44.9
Mapoly0046s0024 Marchantia polymorpha HOM05D000113 ORTHO05D005496 2.1e-27 127.1 316 26.6
Psat3g119320 Pisum sativum HOM05D000113 ORTHO05D023319 3.0e-18 96.7 263 28.9
Actinidia24008 Actinidia chinensis HOM05D000113 ORTHO05D021107 6.1e-11 72.4 111 36.0
CSS0003913 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D023319 7.5e-09 65.5 51 60.8
CSS0018966 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D023319 7.5e-09 65.5 51 60.8
Actinidia24009 Actinidia chinensis HOM05D000113 ORTHO05D023319 6.3e-08 62.4 51 56.9
Potri.001G310200 Populus trichocarpa HOM05D000113 ORTHO05D332511 5.3e-07 59.3 79 38.0


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