Gene: Solyc11g010310.2

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc11g010310.2
Transcript Identifier Solyc11g010310.2.1
Gene Type Coding gene
Location SL4.0ch11 : 3423426-3430267 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000113
#Genes/#Species 2932/100
Phylogenetic origin

ID ORTHO05D005496
#Genes/#Species 156/90
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc11g010310.2.1
uniprot A0A3Q7IR33
gene_id Solyc11g010310

Descriptions

Short descriptions
Ortholog descriptions

Description ATP-dependent RNA helicase DEAH11, chloroplastic-like (AHRD V3.3 *** A0A2I4EF57_9ROSI)

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003723	IBA IEA	GOA Database	RNA binding
GO:0003723	IEA	InterPro	RNA binding
GO:0004386	IEA	GOA Database	helicase activity
GO:0004386	IEA	InterPro	helicase activity
GO:0046872	IEA	GOA Database	metal ion binding
GO:0000166	IEA	GOA Database	nucleotide binding
GO:0016787	IEA	GOA Database	hydrolase activity
GO:0016740	IEA	GOA Database	transferase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR011545	DEAD/DEAH box helicase domain
IPR002867	IBR domain
IPR004087	K Homology domain
IPR036612	K Homology domain, type 1 superfamily
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR001650	Helicase, C-terminal
IPR007502	Helicase-associated domain
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
19.2.2.1.4.4.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Helicase)