Gene: Nitab4.5_0005930g0010

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0005930g0010
  • Transcript Identifier Nitab4.5_0005930g0010.1
  • Gene Type Coding gene
  • Location Nitab4.5_0005930 : 33730-40791 : positive

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0005930g0010.1
  • SR1-identifier Nta09g02670.1

Descriptions

  • Description Zinc finger, C6HC-type, Zinc finger, RING-type, conserved site, DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site, Domain of unknown function DUF1605, K Homology domain, Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type, P-loop containing nucleoside triphosphate hydrolase, Helicase, superfamily 1/2, ATP-binding domain, Zinc finger, C2H2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc04g014210.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
InterProRNA binding
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000113
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc04g014210.3
GO:0004386
ISO
PLAZA Homology (enrichment)helicase activity HOM05D000113

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR002867 IBR domain
IPR004087 K Homology domain
IPR036612 K Homology domain, type 1 superfamily
Mapman id Description
19.2.2.1.4.4.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Helicase)