Gene: Medtr3g086770

General Information

Structural Information

Species Medicago truncatula
Gene Identifier Medtr3g086770
Transcript Identifier Medtr3g086770.1
Gene Type Coding gene
Location chr3 : 39316890-39323283 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000113
#Genes/#Species 2932/100
Phylogenetic origin

ID ORTHO05D005496
#Genes/#Species 156/90
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 31055707
id Medtr3g086770.JCVIMt4.0v1

Descriptions

Short descriptions
Ortholog descriptions

Description helicase, IBR and zinc finger protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc04g014210.3

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004386	IEA	InterPro	helicase activity
GO:0046872	IEA	InterPro	metal ion binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc04g014210.3

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002867	IBR domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR007502	Helicase-associated domain
IPR018957	Zinc finger, C3HC4 RING-type
IPR001650	Helicase, C-terminal
IPR042035	DEAH helicase, winged-helix domain
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR011709	Domain of unknown function DUF1605
IPR011545	DEAD/DEAH box helicase domain
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
19.2.2.1.4.4.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Helicase)