Gene: FvH4_1g20200

General Information

Structural Information

Species Fragaria vesca
Gene Identifier FvH4_1g20200
Transcript Identifier FvH4_1g20200.t1
Gene Type Coding gene
Location Fvb1 : 12415050-12421233 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000113
#Genes/#Species 2932/100
Phylogenetic origin

ID ORTHO05D005496
#Genes/#Species 156/90
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id FvH4_1g20200.v4.0.a2
pacid 50694651

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR18934//PTHR18934:SF140 - ATP-DEPENDENT RNA HELICASE // HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc04g014210.3

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004386	IEA	InterPro	helicase activity
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc04g014210.3

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002867	IBR domain
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR001650	Helicase, C-terminal
IPR011709	Domain of unknown function DUF1605
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR007502	Helicase-associated domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR011545	DEAD/DEAH box helicase domain

Mapman id	Description
19.2.2.1.4.4.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Helicase)