Gene: Gohir.A10G087100
General Information
Structural Information
- Species Gossypium hirsutum
- Gene Identifier Gohir.A10G087100
- Transcript Identifier Gohir.A10G087100.1
- Gene Type Coding gene
- Location A10 : 16686331-16693637 : positive
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D005496
- #Genes/#Species 156/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Gohir.A10G087100.v2.1
- pacid 42411472
Descriptions
- Description PTHR18934//PTHR18934:SF140 - ATP-DEPENDENT RNA HELICASE // HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004386 | IEA | InterPro | helicase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR001650 | Helicase, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR002867 | IBR domain |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR007502 | Helicase-associated domain |
| IPR011709 | Domain of unknown function DUF1605 |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.4.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Helicase) |