Gene: Os07g0621500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os07g0621500
  • Transcript Identifier Os07t0621500-01
  • Gene Type Coding gene
  • Location chr07 : 25683515-25688013 : negative

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os07t0621500-01
  • MSU-ID LOC_Os07g42900.1
  • uniprot Q0D4K1

Descriptions

  • Description Similar to predicted protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc04g014210.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0004386
IEA
InterProhelicase activity
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000113
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc04g014210.3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR035979 RNA-binding domain superfamily
IPR007502 Helicase-associated domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR002867 IBR domain
IPR011709 Domain of unknown function DUF1605
Mapman id Description
19.2.2.1.4.4.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Helicase)