Gene: Thhalv10012419m.g

General Information

Structural Information

Species Eutrema salsugineum
Gene Identifier Thhalv10012419m.g
Transcript Identifier Thhalv10012419m
Gene Type Coding gene
Location scaffold_2 : 3307352-3313194 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000113
#Genes/#Species 2932/100
Phylogenetic origin

ID ORTHO05D005496
#Genes/#Species 156/90
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Thhalv10012419m.g.v1.0
pacid 20204421

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR18934:SF140 - HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc04g014210.3

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004386	IEA	InterPro	helicase activity
GO:0046872	IEA	InterPro	metal ion binding
GO:0005524	ISO	PLAZA Homology (enrichment)	ATP binding	HOM05D000113
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc04g014210.3

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR007502	Helicase-associated domain
IPR002867	IBR domain
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR011709	Domain of unknown function DUF1605
IPR001650	Helicase, C-terminal
IPR042035	DEAH helicase, winged-helix domain
IPR018957	Zinc finger, C3HC4 RING-type
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR014001	Helicase superfamily 1/2, ATP-binding domain

Mapman id	Description
19.2.2.1.4.4.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Helicase)