Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p46260 Brassica napus HOM05D005147 ORTHO05D006132 2.3e-41 171.8 85 100.0
BcaC06g35123 Brassica carinata HOM05D005147 ORTHO05D006132 5.3e-30 134.0 69 95.7
C05p37710 Brassica napus HOM05D005147 ORTHO05D006132 5.3e-30 134.0 69 95.7
BraA09t41139Z Brassica rapa HOM05D005147 ORTHO05D006132 2.6e-29 131.7 76 86.8
A03p60580 Brassica napus HOM05D005147 ORTHO05D006132 7.6e-29 130.2 76 86.8
BolC9t55790H Brassica oleracea HOM05D005147 ORTHO05D006132 1.3e-28 129.4 69 92.8
A09p57480 Brassica napus HOM05D005147 ORTHO05D006132 1.7e-28 129.0 69 92.8
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 2.7e-26 121.7 79 79.7
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 2.7e-26 121.7 79 79.7
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 4.6e-26 120.9 79 79.7
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 1.3e-25 119.4 79 77.2
BcaC05g27774 Brassica carinata HOM05D005147 ORTHO05D006132 5.1e-25 117.5 69 88.4
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 3.3e-24 114.8 79 75.9
BcaC04g21654 Brassica carinata HOM05D000305 ORTHO05D000065 1.6e-23 112.5 55 96.4
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 2.1e-23 112.1 79 72.2
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 4.8e-23 110.9 77 72.7
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 8.2e-23 110.2 78 70.5
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 1.1e-22 109.8 79 72.2
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 6.9e-22 107.1 78 69.2
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 9.0e-22 106.7 79 68.4
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 5.8e-21 104.0 72 73.6
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 1.1e-19 99.8 79 62.0
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 1.9e-19 99.0 78 64.1
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 2.5e-19 98.6 72 66.7
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 4.2e-19 97.8 79 63.3
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 5.5e-19 97.4 72 65.3
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 7.1e-19 97.1 72 66.7
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 9.3e-19 96.7 72 68.1
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 9.3e-19 96.7 78 61.5
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 1.6e-18 95.9 72 63.9
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 1.6e-18 95.9 72 68.1
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 1.6e-18 95.9 72 65.3
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 2.1e-18 95.5 79 60.8
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 2.1e-18 95.5 72 63.9
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 2.7e-18 95.1 72 65.3
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 2.7e-18 95.1 78 60.3
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 2.7e-18 95.1 78 60.3
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 2.7e-18 95.1 72 62.5
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 2.7e-18 95.1 72 66.7
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 3.5e-18 94.7 72 65.3
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 3.5e-18 94.7 78 60.3
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 3.5e-18 94.7 78 60.3
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 4.6e-18 94.4 72 65.3
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 4.6e-18 94.4 72 65.3
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 4.6e-18 94.4 72 65.3
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 4.6e-18 94.4 78 60.3
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 6.0e-18 94.0 72 63.9
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 6.0e-18 94.0 79 60.8
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 6.0e-18 94.0 72 63.9
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 7.9e-18 93.6 77 59.7
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 1.0e-17 93.2 72 63.9
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 1.0e-17 93.2 72 63.9
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 1.0e-17 93.2 72 62.5
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 1.3e-17 92.8 72 63.9
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 1.3e-17 92.8 79 59.5
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 1.3e-17 92.8 78 59.0
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 1.8e-17 92.4 79 59.5
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 1.8e-17 92.4 72 62.5
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 1.8e-17 92.4 78 59.0
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 2.3e-17 92.0 79 54.4
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 2.3e-17 92.0 72 62.5
Haze_04617 Corylus avellana HOM05D005147 ORTHO05D006132 2.3e-17 92.0 72 61.1
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 2.3e-17 92.0 72 62.5
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 2.3e-17 92.0 72 63.9
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 3.0e-17 91.7 72 63.9
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.9e-17 91.3 71 63.4
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 3.9e-17 91.3 71 62.0
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 3.9e-17 91.3 72 61.1
vmacro07058 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 3.9e-17 91.3 72 62.5
C02p08230 Brassica napus HOM05D005147 ORTHO05D006132 5.1e-17 90.9 81 63.0
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 5.1e-17 90.9 72 63.9
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 5.1e-17 90.9 69 63.8
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 5.1e-17 90.9 72 61.1
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 5.1e-17 90.9 69 62.3
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 6.7e-17 90.5 72 61.1
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 6.7e-17 90.5 72 61.1
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 6.7e-17 90.5 72 62.5
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 6.7e-17 90.5 72 62.5
Migut.F02087 Erythranthe guttata HOM05D005147 ORTHO05D006132 8.7e-17 90.1 72 61.1
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.1e-16 89.7 69 62.3
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.1e-16 89.7 69 62.3
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 2.5e-16 88.6 70 61.4
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 3.3e-16 88.2 72 61.1
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 4.3e-16 87.8 72 62.5
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 4.3e-16 87.8 72 59.7
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 9.7e-16 86.7 69 58.0
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 1.3e-15 86.3 72 58.3
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 1.3e-15 86.3 72 56.9
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 2.2e-15 85.5 72 58.3
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 2.8e-15 85.1 72 58.3
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 2.8e-15 85.1 72 58.3
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 2.8e-15 85.1 72 58.3
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 2.8e-15 85.1 72 56.9
Atru.chr10.460 Acer truncatum HOM05D005147 ORTHO05D006132 3.7e-15 84.7 79 51.9
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 3.7e-15 84.7 72 58.3
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 3.7e-15 84.7 79 54.4
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 1.1e-14 83.2 70 57.1
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 1.8e-14 82.4 69 55.1
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 2.4e-14 82.0 69 59.4
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 3.1e-14 81.6 72 55.6
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 1.5e-13 79.3 72 56.9
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.0e-12 76.6 66 56.1
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 7.2e-11 70.5 69 52.2
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 1.0e-09 66.6 70 50.0
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 3.0e-09 65.1 72 48.6
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 1.1e-08 63.2 46 65.2
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 1.5e-08 62.8 79 43.0
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 7.4e-08 60.5 51 54.9
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 9.7e-08 60.1 65 49.2
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 9.7e-08 60.1 70 42.9
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 8.2e-07 57.0 72 40.3
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 8.2e-07 57.0 52 55.8
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 2.4e-06 55.5 29 79.3


User provided reference genes

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