Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26892 Brassica carinata HOM05D000113 ORTHO05D005496 3.3e-217 758.1 373 100.0
BcaB06g26902 Brassica carinata HOM05D000113 ORTHO05D005496 3.0e-170 602.1 310 95.5
BolC3t13030H Brassica oleracea HOM05D000113 ORTHO05D005496 1.5e-158 563.1 304 90.8
BcaB01g05540 Brassica carinata HOM05D000113 ORTHO05D005496 2.2e-157 559.3 304 90.1
A03p04500 Brassica napus HOM05D000113 ORTHO05D005496 3.8e-157 558.5 304 90.1
BraA03t09794Z Brassica rapa HOM05D000113 ORTHO05D005496 3.8e-157 558.5 304 90.1
C03p05000 Brassica napus HOM05D000113 ORTHO05D005496 8.5e-157 557.4 304 89.5
Sp6g33080 Schrenkiella parvula HOM05D000113 ORTHO05D005496 1.4e-148 530.0 303 85.8
BcaB08g37113 Brassica carinata HOM05D000113 ORTHO05D005496 4.5e-142 508.4 295 84.4
AL6G20870 Arabidopsis lyrata HOM05D000113 ORTHO05D005496 1.1e-140 503.8 303 80.5
Carub.0006s0884 Capsella rubella HOM05D000113 ORTHO05D005496 3.6e-139 498.8 300 80.7
BolC9t59477H Brassica oleracea HOM05D000113 ORTHO05D005496 8.0e-139 497.7 304 82.2
BcaC04g19309 Brassica carinata HOM05D000113 ORTHO05D005496 1.4e-138 496.9 304 82.2
A10p27230 Brassica napus HOM05D000113 ORTHO05D005496 2.3e-138 496.1 296 83.1
CARHR202930 Cardamine hirsuta HOM05D000113 ORTHO05D005496 4.0e-138 495.4 303 79.9
AT5G10370 Arabidopsis thaliana HOM05D000113 ORTHO05D005496 1.2e-137 493.8 303 79.5
BraA10t44773Z Brassica rapa HOM05D000113 ORTHO05D005496 1.5e-137 493.4 296 83.4
AT4G01020 Arabidopsis thaliana HOM05D000113 ORTHO05D005496 4.4e-137 491.9 303 78.5
C09p67040 Brassica napus HOM05D000113 ORTHO05D005496 4.4e-137 491.9 304 81.6
Thhalv10012419m.g Eutrema salsugineum HOM05D000113 ORTHO05D005496 1.6e-134 483.4 303 78.9
Aa31LG3G16810 Aethionema arabicum HOM05D000113 ORTHO05D005496 3.8e-133 478.8 309 76.1
THA.LOC104798664 Tarenaya hassleriana HOM05D000113 ORTHO05D005496 3.6e-115 419.1 308 67.9
Gorai.003G041600 Gossypium raimondii HOM05D000113 ORTHO05D005496 3.2e-95 352.8 310 54.5
Gohir.D03G040800 Gossypium hirsutum HOM05D000113 ORTHO05D005496 1.2e-94 350.9 310 54.5
Gohir.A02G129900 Gossypium hirsutum HOM05D000113 ORTHO05D005496 2.7e-94 349.7 310 54.2
COL.COLO4_27299 Corchorus olitorius HOM05D000113 ORTHO05D005496 7.8e-94 348.2 294 56.5
Gohir.A10G087100 Gossypium hirsutum HOM05D000113 ORTHO05D005496 2.3e-93 346.7 307 54.1
Duzib147G1158 Durio zibethinus HOM05D000113 ORTHO05D005496 3.9e-93 345.9 307 54.4
Gorai.011G111000 Gossypium raimondii HOM05D000113 ORTHO05D005496 8.6e-93 344.7 307 53.7
Gohir.D10G101300 Gossypium hirsutum HOM05D000113 ORTHO05D005496 1.5e-92 344.0 307 53.7
Duzib264G0979 Durio zibethinus HOM05D000113 ORTHO05D005496 1.9e-92 343.6 305 53.1
Potri.005G071500 Populus trichocarpa HOM05D000113 ORTHO05D005496 1.9e-92 343.6 293 56.7
Ciclev10024688m.g Citrus clementina HOM05D000113 ORTHO05D005496 7.3e-92 341.7 293 54.6
CiPaw.04G104000 Carya illinoinensis HOM05D000113 ORTHO05D005496 1.6e-91 340.5 293 56.0
Cpa.g.sc55.67 Carica papaya HOM05D000113 ORTHO05D005496 6.2e-91 338.6 297 56.6
CSS0032056 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005496 2.4e-90 336.7 293 56.3
CiPaw.03G146200 Carya illinoinensis HOM05D000113 ORTHO05D005496 8.9e-90 334.7 293 55.6
Sabra05G0058500 Salix brachista HOM05D000113 ORTHO05D005496 1.5e-89 334.0 294 55.8
Lj2C539T3 Lonicera japonica HOM05D000113 ORTHO05D005496 4.4e-89 332.4 293 54.6
Eucgr.H04740 Eucalyptus grandis HOM05D000113 ORTHO05D005496 5.8e-89 332.0 298 52.7
Glyma.18G014800 Glycine max HOM05D000113 ORTHO05D005496 3.8e-88 329.3 311 51.4
Atru.chr3.1339 Acer truncatum HOM05D000113 ORTHO05D005496 2.4e-87 326.6 295 52.5
Haze_24824 Corylus avellana HOM05D000113 ORTHO05D005496 4.1e-87 325.9 353 47.3
Haze_24829 Corylus avellana HOM05D000113 ORTHO05D005496 4.1e-87 325.9 353 47.3
Actinidia06536 Actinidia chinensis HOM05D000113 ORTHO05D005496 5.4e-87 325.5 294 53.7
Cfa002587 Carpinus fangiana HOM05D000113 ORTHO05D005496 5.4e-87 325.5 295 54.2
TPR.G30542 Trifolium pratense HOM05D000113 ORTHO05D005496 7.1e-87 325.1 307 54.1
Glyma.11G242300 Glycine max HOM05D000113 ORTHO05D005496 9.2e-87 324.7 307 51.1
Dinv08866 Davidia involucrata HOM05D000113 ORTHO05D005496 3.5e-86 322.8 304 52.0
Phvul.001G254100 Phaseolus vulgaris HOM05D000113 ORTHO05D005496 3.5e-86 322.8 324 49.4
Psat1g084000 Pisum sativum HOM05D000113 ORTHO05D005496 3.5e-86 322.8 295 55.3
QL06p047959 Quercus lobata HOM05D000113 ORTHO05D005496 3.5e-86 322.8 293 53.2
Sc03g0000190 Simmondsia chinensis HOM05D000113 ORTHO05D005496 3.5e-86 322.8 296 51.7
TWI77G0223 Tripterygium wilfordii HOM05D000113 ORTHO05D005496 3.5e-86 322.8 295 53.2
Ca_16506_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005496 1.0e-85 321.2 295 53.9
Ca_30638_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005496 1.0e-85 321.2 295 53.9
Nn5g29734 Nelumbo nucifera HOM05D000113 ORTHO05D005496 1.0e-85 321.2 315 51.4
Medtr3g086770 Medicago truncatula HOM05D000113 ORTHO05D005496 2.3e-85 320.1 293 54.3
Nitab4.5_0002334g0050 Nicotiana tabacum HOM05D000113 ORTHO05D005496 4.3e-84 315.8 292 52.1
VMungo1383G1146 Vigna mungo HOM05D000113 ORTHO05D005496 5.6e-84 315.5 290 51.4
MD01G1036600 Malus domestica HOM05D000113 ORTHO05D005496 7.3e-84 315.1 294 50.7
Peaxi162Scf00237g01219 Petunia axillaris HOM05D000113 ORTHO05D005496 7.3e-84 315.1 310 49.7
Prupe.6G193800 Prunus persica HOM05D000113 ORTHO05D005496 9.6e-84 314.7 295 49.5
Dinv09001 Davidia involucrata HOM05D000113 ORTHO05D005496 2.1e-83 313.5 298 50.3
Lj6g0026739 Lotus japonicus HOM05D000113 ORTHO05D005496 2.1e-83 313.5 295 52.5
Nitab4.5_0000241g0130 Nicotiana tabacum HOM05D000113 ORTHO05D005496 2.1e-83 313.5 307 48.9
CsaV3_4G009030 Cucumis sativus L. HOM05D000113 ORTHO05D005496 4.7e-83 312.4 291 52.9
SalBow1G6336 Salvia bowleyana HOM05D000113 ORTHO05D005496 8.1e-83 311.6 306 50.0
FAN26G3479 Fragaria x ananassa HOM05D000113 ORTHO05D005496 1.1e-82 311.2 296 50.7
Lj5g0010678 Lotus japonicus HOM05D000113 ORTHO05D005496 1.1e-82 311.2 295 52.5
Nitab4.5_0005930g0010 Nicotiana tabacum HOM05D000113 ORTHO05D005496 1.1e-82 311.2 307 48.5
CANSAT01G0367 Cannabis sativa HOM05D000113 ORTHO05D005496 1.4e-82 310.8 294 51.4
ClCG10G008390 Citrullus lanatus HOM05D000113 ORTHO05D005496 1.4e-82 310.8 288 52.4
RcHm_v2.0_Chr2g0112281 Rosa chinensis HOM05D000113 ORTHO05D005496 1.8e-82 310.5 294 52.4
MELO3C018998.2 Cucumis melo HOM05D000113 ORTHO05D005496 4.0e-82 309.3 291 52.9
MBI02_g10702_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005496 4.0e-82 309.3 297 50.5
FAN23G0752 Fragaria x ananassa HOM05D000113 ORTHO05D005496 5.2e-82 308.9 296 50.7
FvH4_1g20200 Fragaria vesca HOM05D000113 ORTHO05D005496 6.9e-82 308.5 296 50.3
Medtr1g037750 Medicago truncatula HOM05D000113 ORTHO05D005496 6.9e-82 308.5 295 51.9
FAN19G2146 Fragaria x ananassa HOM05D000113 ORTHO05D005496 9.0e-82 308.1 296 50.3
FAN28G1056 Fragaria x ananassa HOM05D000113 ORTHO05D005496 9.0e-82 308.1 296 50.3
Medtr3g014030 Medicago truncatula HOM05D000113 ORTHO05D005496 9.0e-82 308.1 295 51.9
Rhsim10G0168800 Rhododendron simsii HOM05D000113 ORTHO05D005496 1.2e-81 307.8 312 50.3
Sed0023847 Sechium edule HOM05D000113 ORTHO05D005496 1.2e-81 307.8 289 53.3
DCAR_014198 Daucus carota HOM05D000113 ORTHO05D005496 1.5e-81 307.4 290 51.4
Dinv24167 Davidia involucrata HOM05D000113 ORTHO05D005496 2.0e-81 307.0 298 50.3
TAR628G1021 Trochodendron aralioides HOM05D000113 ORTHO05D005496 2.6e-81 306.6 297 51.9
Nn5g29984 Nelumbo nucifera HOM05D000113 ORTHO05D005496 4.4e-81 305.8 295 51.2
arahy.Tifrunner.gnm1.ann1.KS9FMV Arachis hypogaea HOM05D000113 ORTHO05D005496 5.8e-81 305.4 297 50.5
PSO761G0046 Papaver somniferum HOM05D000113 ORTHO05D005496 5.8e-81 305.4 298 50.7
Peaxi162Scf00569g00315 Petunia axillaris HOM05D000113 ORTHO05D005496 5.8e-81 305.4 305 49.2
Actinidia00284 Actinidia chinensis HOM05D000113 ORTHO05D005496 9.9e-81 304.7 301 49.5
Hund14100 Selenicereus undatus HOM05D000113 ORTHO05D005496 9.9e-81 304.7 290 51.0
Sopen04g006310 Solanum pennellii HOM05D000113 ORTHO05D005496 9.9e-81 304.7 301 50.5
arahy.Tifrunner.gnm1.ann1.FHUE8B Arachis hypogaea HOM05D000113 ORTHO05D005496 1.7e-80 303.9 297 50.2
TPR.G1396 Trifolium pratense HOM05D000113 ORTHO05D005496 1.7e-80 303.9 308 50.3
PGSC0003DMG400023635 Solanum tuberosum HOM05D000113 ORTHO05D005496 2.2e-80 303.5 303 50.2
PGR102G0466 Punica granatum HOM05D000113 ORTHO05D005496 2.9e-80 303.1 314 46.5
Solyc04g014210.3 Solanum lycopersicum HOM05D000113 ORTHO05D005496 3.8e-80 302.8 301 50.2
CAN.G525.46 Capsicum annuum HOM05D000113 ORTHO05D005496 6.4e-80 302.0 292 51.0
EL10Ac6g14815 Beta vulgaris HOM05D000113 ORTHO05D005496 1.4e-79 300.8 311 49.5
CSS0007444 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005496 1.4e-79 300.8 302 49.0
CSS0032648 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005496 1.4e-79 300.8 302 49.0
ECA246G2046 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-79 300.1 292 51.4
MBI06_g03318_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005496 3.2e-79 299.7 301 48.5
Aqoxy4G02794 Aquilegia oxysepala HOM05D000113 ORTHO05D005496 1.6e-78 297.4 306 47.4
Potri.017G050100 Populus trichocarpa HOM05D000113 ORTHO05D005496 2.1e-78 297.0 294 49.3
Lalb_Chr23g0277561 Lupinus albus HOM05D000113 ORTHO05D005496 2.7e-78 296.6 290 49.3
PSO700G0222 Papaver somniferum HOM05D000113 ORTHO05D005496 2.7e-78 296.6 298 49.7
AUR62027200 Chenopodium quinoa HOM05D000113 ORTHO05D005496 3.5e-78 296.2 304 50.7
Ah.02g126230 Amaranthus hybridus HOM05D000113 ORTHO05D005496 6.0e-78 295.4 327 46.8
Migut.H02323 Erythranthe guttata HOM05D000113 ORTHO05D005496 6.0e-78 295.4 301 48.5
AUR62003267 Chenopodium quinoa HOM05D000113 ORTHO05D005496 7.8e-78 295.0 296 50.3
MSTRG.2587 Avicennia marina HOM05D000113 ORTHO05D005496 1.3e-77 294.3 292 48.6
Lalb_Chr08g0230951 Lupinus albus HOM05D000113 ORTHO05D005496 1.3e-77 294.3 294 49.3
Solyc11g010310.2 Solanum lycopersicum HOM05D000113 ORTHO05D005496 1.3e-77 294.3 301 47.8
CDE10G0712 Ceratophyllum demersum HOM05D000113 ORTHO05D005496 2.3e-77 293.5 285 47.4
Sabra17G0036700 Salix brachista HOM05D000113 ORTHO05D005496 2.3e-77 293.5 293 49.1
Sabra17G0042100 Salix brachista HOM05D000113 ORTHO05D005496 2.3e-77 293.5 293 49.1
Sopen11g005090 Solanum pennellii HOM05D000113 ORTHO05D005496 2.3e-77 293.5 299 48.2
SGA_v2.0_scaffold108G30899 Striga asiatica HOM05D000113 ORTHO05D005496 1.9e-76 290.4 327 45.0
SGA_v2.0_scaffold421G51436 Striga asiatica HOM05D000113 ORTHO05D005496 1.9e-76 290.4 297 47.8
Manes.10G103500 Manihot esculenta HOM05D000113 ORTHO05D005496 2.5e-76 290.0 293 47.4
PGSC0003DMG400016218 Solanum tuberosum HOM05D000113 ORTHO05D005496 3.3e-76 289.7 301 47.2
Lsat_1_v5_gn_5_44701 Lactuca sativa HOM05D000113 ORTHO05D005496 2.8e-75 286.6 285 48.1
Cc07_g14540 Coffea canephora HOM05D000113 ORTHO05D005496 3.1e-74 283.1 297 47.1
Os07g0621500 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D005496 1.5e-73 280.8 307 43.6
CAN.G905.7 Capsicum annuum HOM05D000113 ORTHO05D005496 2.0e-73 280.4 291 48.8
HanXRQChr15g0469421 Helianthus annuus HOM05D000113 ORTHO05D005496 1.3e-72 277.7 292 46.6
Zm00001eb327760 Zea mays HOM05D000113 ORTHO05D005496 1.4e-71 274.2 305 45.9
CSS0007191 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005496 4.2e-71 272.7 298 46.3
ATR0807G003 Amborella trichopoda HOM05D000113 ORTHO05D005496 1.0e-69 268.1 295 45.1
HPP92_010964 Vanilla planifolia HOM05D000113 ORTHO05D005496 1.0e-69 268.1 304 43.8
PGSC0003DMG402016146 Solanum tuberosum HOM05D000113 ORTHO05D005496 1.6e-67 260.8 262 48.1
unitig_899.g14557 Utricularia gibba HOM05D000113 ORTHO05D005496 9.0e-66 255.0 277 46.9
vmacro12989 Vaccinium macrocarpon HOM05D000113 ORTHO05D005496 1.2e-62 244.6 301 43.2
SEGI_02546 Sequoiadendron giganteum HOM05D000113 ORTHO05D005496 5.6e-60 235.7 299 39.5
Nitab4.5_0005401g0050 Nicotiana tabacum HOM05D000113 ORTHO05D005496 4.6e-54 216.1 219 48.4
CAN.G960.13 Capsicum annuum HOM05D000113 ORTHO05D021107 1.4e-50 204.5 218 45.9
CAN.G388.7 Capsicum annuum HOM05D000113 ORTHO05D021107 1.2e-46 191.4 278 37.8
CAN.G1463.6 Capsicum annuum HOM05D000113 ORTHO05D021107 7.4e-44 182.2 276 37.7
Sed0005908 Sechium edule HOM05D000113 ORTHO05D005496 9.7e-44 181.8 182 49.5
Mapoly0046s0024 Marchantia polymorpha HOM05D000113 ORTHO05D005496 7.7e-41 172.2 298 35.9
Oeu008640.1 Olea europaea HOM05D000113 ORTHO05D005496 1.4e-39 167.9 148 52.7
CAN.G1546.5 Capsicum annuum HOM05D000113 ORTHO05D021107 7.4e-36 155.6 236 36.9
CAN.G960.12 Capsicum annuum HOM05D005332 ORTHO05D006861 2.9e-32 143.7 235 34.5
CAN.G1546.4 Capsicum annuum HOM05D000113 ORTHO05D021107 1.5e-28 131.3 200 35.5
Potri.001G310200 Populus trichocarpa HOM05D000113 ORTHO05D332511 3.0e-13 80.5 81 49.4
Actinidia24008 Actinidia chinensis HOM05D000113 ORTHO05D021107 5.2e-13 79.7 106 36.8
Psat3g119320 Pisum sativum HOM05D000113 ORTHO05D023319 3.1e-10 70.5 198 30.8
CSS0003913 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D023319 3.6e-06 57.0 51 54.9
CSS0018966 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D023319 3.6e-06 57.0 51 54.9


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