Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ST06G021360
(Solanum tuberosum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum tuberosum | Orthologous gene family | ST06G021360 ST08G021310 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | ST06G021360 | 1 | ||
| Tree-based ortholog | ST06G021360 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G02430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G02430 | 1 | ||
| Tree-based ortholog | 1-to-many | ATR_00073G00470 ATR_00002G02430 | 2 | ||
| Arabidopsis lyrata | Anchor point | N/A | AL8G01390 AL1G33920 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G20560 | 1 | ||
| Tree-based ortholog | 1-to-many | AL8G01390 AL1G33920 AL4G20560 | 3 | ||
| Arabidopsis thaliana | Anchor point | N/A | AT5G46780 AT1G32610 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G35230 | 1 | ||
| Tree-based ortholog | 1-to-many | AT5G46780 AT1G32610 AT2G35230 | 3 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV5G04590 | 1 | |
| Anchor point | N/A | BV5G04590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G04590 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV5G04590 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR04G20890 | 1 | |
| Anchor point | N/A | BR02G28890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G20890 | 1 | ||
| Tree-based ortholog | 1-to-many | BR06G36720 BR02G28890 BR03G17360 ... | 5 | ||
| Capsella rubella | Anchor point | N/A | CRU_008G01140 CRU_001G29570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G29570 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_008G01140 CRU_001G29570 CRU_004G16350 | 3 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00071G00560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00071G00560 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00071G00560 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL09G11570 CL10G00500 | 2 | |
| Anchor point | N/A | CL09G11570 CL10G00500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G11570 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL10G00500 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00339G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00339G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00339G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00021G01600 CM01596G01220 | 2 | |
| Anchor point | N/A | CM01596G01220 CM00021G01600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G01600 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00021G01600 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G18070 | 1 | |
| Anchor point | N/A | EG0004G18070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G18070 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0004G18070 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV4G18380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G18380 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV4G18380 | 1 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM01G02280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM01G02280 | 1 | ||
| Tree-based ortholog | 1-to-many | GM01G02280 GM08G36740 GM08G36730 ... | 5 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR03G18180 | 1 | |
| Anchor point | N/A | GR04G18540 GR03G18180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G18180 | 1 | ||
| Tree-based ortholog | 1-to-many | GR04G18540 GR06G21650 GR03G18180 | 3 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G026380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G026380 | 1 | ||
| Tree-based ortholog | 1-to-many | LJ2G026380 LJ3G044270 LJ1G005700 | 3 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD14G010060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G010060 MD00G003300 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G003300 MD14G010060 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME00080G00410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00080G00410 | 1 | ||
| Tree-based ortholog | 1-to-many | ME07571G00670 ME00080G00410 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT5G030570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G030570 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT5G030570 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00001G00660 | 1 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G14240 PT03G09180 | 2 | |
| Anchor point | N/A | PT01G14240 PT03G09180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G14240 PT03G09180 | 2 | ||
| Tree-based ortholog | 1-to-many | PT03G09180 PT01G14240 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G04030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G04030 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_005G04030 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30076G01290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30076G01290 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC30076G01290 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G061190 | 1 | |
| Anchor point | N/A | SL06G061190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G061190 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL06G061190 | 1 | ||
| Thellungiella parvula | Anchor point | N/A | TP2G11590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G17450 | 1 | ||
| Tree-based ortholog | 1-to-many | TP2G11590 TP4G17450 | 2 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G22670 | 1 | |
| Anchor point | N/A | TC0003G22670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G22670 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0003G22670 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV02G02290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G02290 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV02G02290 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G22550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G22550 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM01G22550 | 1 |