Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
MD00G106430
(Malus domestica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | MD00G198180 MD00G106430 MD17G021650 | 3 |  |
| Orthologous gene family | MD00G106430 MD00G198180 MD00G241320 ... | 5 | ||
| Tree-based ortholog | MD00G106430 MD00G198180 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00003G00260 | 1 | |
| Orthologous gene family | many-to-1 | ATR_00003G00260 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR_00003G00260 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL4G35500 | 1 | |
| Orthologous gene family | many-to-many | AL0G00650 AL4G35500 | 2 | ||
| Tree-based ortholog | many-to-many | AL4G35500 AL0G00650 | 2 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G47300 | 1 | |
| Orthologous gene family | many-to-1 | AT2G47300 | 1 | ||
| Tree-based ortholog | many-to-1 | AT2G47300 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G15230 | 1 | |
| Orthologous gene family | many-to-1 | BV5G15230 | 1 | ||
| Tree-based ortholog | many-to-1 | BV5G15230 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G06510 | 1 | |
| Orthologous gene family | many-to-1 | BR04G06510 | 1 | ||
| Tree-based ortholog | many-to-1 | BR04G06510 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G28910 | 1 | |
| Orthologous gene family | many-to-1 | CRU_004G28910 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_004G28910 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00018G00620 | 1 | |
| Orthologous gene family | many-to-many | CP00018G00620 CP00018G00640 | 2 | ||
| Tree-based ortholog | many-to-many | CP00018G00640 CP00018G00620 | 2 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL07G18530 | 1 | |
| Orthologous gene family | many-to-1 | CL07G18530 | 1 | ||
| Tree-based ortholog | many-to-1 | CL07G18530 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00027G02650 | 1 | |
| Orthologous gene family | many-to-1 | CM00027G02650 | 1 | ||
| Tree-based ortholog | many-to-1 | CM00027G02650 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0004G21120 EG0006G30220 | 2 | |
| Orthologous gene family | many-to-many | EG0004G21120 EG0006G30220 | 2 | ||
| Tree-based ortholog | many-to-many | EG0006G30220 EG0004G21120 | 2 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G27080 | 1 | |
| Orthologous gene family | many-to-1 | FV1G27080 | 1 | ||
| Tree-based ortholog | many-to-1 | FV1G27080 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM16G07720 GM15G29980 | 2 | |
| Orthologous gene family | many-to-many | GM13G06025 GM15G29980 GM16G00200 ... | 5 | ||
| Tree-based ortholog | many-to-many | GM16G34900 GM16G00200 GM13G06025 ... | 5 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G12140 | 1 | |
| Orthologous gene family | many-to-1 | GR07G12140 | 1 | ||
| Tree-based ortholog | many-to-1 | GR07G12140 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G028430 | 1 | |
| Orthologous gene family | many-to-1 | LJ4G028430 | 1 | ||
| Tree-based ortholog | many-to-1 | LJ4G028430 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME05133G00010 | 1 | |
| Orthologous gene family | many-to-1 | ME05133G00010 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G008840 | 1 | |
| Orthologous gene family | many-to-1 | MT4G008840 | 1 | ||
| Tree-based ortholog | many-to-1 | MT4G008840 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G45250 | 1 | |
| Orthologous gene family | many-to-1 | OS11G45250 | 1 | ||
| Tree-based ortholog | many-to-1 | OS11G45250 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00007G02370 | 1 | |
| Orthologous gene family | many-to-1 | PP00007G02360 | 1 | ||
| Tree-based ortholog | many-to-many | PP00007G02360 PP00007G02370 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT02G19410 | 1 | |
| Orthologous gene family | many-to-1 | PT02G19410 | 1 | ||
| Tree-based ortholog | many-to-1 | PT02G19410 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_010G00990 | 1 | |
| Orthologous gene family | many-to-1 | PPE_010G00990 | 1 | ||
| Tree-based ortholog | many-to-1 | PPE_010G00990 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30076G01980 | 1 | |
| Orthologous gene family | many-to-1 | RC30076G01980 | 1 | ||
| Tree-based ortholog | many-to-1 | RC30076G01980 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G007800 | 1 | |
| Orthologous gene family | many-to-1 | SL11G007800 | 1 | ||
| Tree-based ortholog | many-to-1 | SL11G007800 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST11G010660 | 1 | |
| Orthologous gene family | many-to-1 | ST11G010660 | 1 | ||
| Tree-based ortholog | many-to-1 | ST11G010660 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G11950 | 1 | |
| Orthologous gene family | many-to-1 | TP7G11950 | 1 | ||
| Tree-based ortholog | many-to-1 | TP7G11950 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G31380 | 1 | |
| Orthologous gene family | many-to-1 | TC0001G31380 | 1 | ||
| Tree-based ortholog | many-to-1 | TC0001G31380 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV09G10970 VV12G01740 | 2 | |
| Orthologous gene family | many-to-many | VV09G10970 VV12G01740 | 2 | ||
| Tree-based ortholog | many-to-many | VV09G10970 VV12G01740 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G30610 | 1 | |
| Orthologous gene family | many-to-1 | ZM07G30610 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM07G30610 | 1 |