Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL1G26940
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G26940 | 1 |  |
| Tree-based ortholog | AL7G39950 AL7G39960 AL1G26940 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL1G26940 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00214G00020 ATR_00045G02420 ATR_00072G01300 | 3 | |
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT1G26680 | 1 | |
| Anchor point | N/A | AT1G26680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G26680 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV3G07760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV0G15530 BV0G15510 | 2 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR09G30000 BR09G30010 BR09G30020 | 3 | |
| Tree-based ortholog | many-to-many | BR09G30020 BR09G30000 BR09G30010 | 3 | ||
| Anchor point | N/A | BR07G08270 BR09G30000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G30010 BR09G30000 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_001G23380 CRU_007G08410 | 2 | |
| Tree-based ortholog | many-to-1 | CRU_007G08410 | 1 | ||
| Anchor point | N/A | CRU_001G23380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G23380 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G16770 | 1 | |
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G05520 | 1 | |
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G06420 EG0009G03300 | 2 | |
| Fragaria vesca | Tree-based ortholog | many-to-many | FV7G10760 FV7G10680 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV7G10680 FV7G10760 | 2 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM07G19395 | 1 | |
| Gossypium raimondii | Tree-based ortholog | many-to-1 | GR01G04030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G04030 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD00G489280 MD15G035550 MD15G006770 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G489280 MD15G035550 | 2 | ||
| Manihot esculenta | Tree-based ortholog | many-to-many | ME00847G02700 ME03593G00030 ME03049G00810 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03049G00810 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G005495 MT3G005420 MT3G005460 | 3 | |
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G42370 | 1 | |
| Tree-based ortholog | many-to-1 | OS03G11370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G42370 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G23010 | 1 | |
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_007G07820 PPE_004G17100 | 2 | |
| Ricinus communis | Tree-based ortholog | many-to-many | RC29848G00360 RC30170G02980 RC29848G00350 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC29848G00350 RC29848G00360 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL04G064830 SL08G006200 SL08G006230 ... | 11 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G006190 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST08G007300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G007350 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-many | TP1G22120 TP7G29510 | 2 | |
| Anchor point | N/A | TP1G22120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G22120 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0009G00940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G00940 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G07610 | 1 | |
| Zea mays | Tree-based ortholog | many-to-1 | ZM02G20420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G20420 | 1 |