Interactive Phylogenetics Module

Gene Id
Zjn_sc00013.1.g06640.1.sm.mk

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00013.1.g06640.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M007573 ORTHO04x5M009717 6.3e-128 459.5 247 100.0
Seita.9G062200 Setaria italica HOM04x5M007573 ORTHO04x5M009717 1.4e-63 245.7 238 65.5
Misin02G040400 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M009717 1.9e-63 245.4 244 62.7
Sobic.001G063100 Sorghum bicolor HOM04x5M007573 ORTHO04x5M009717 2.5e-60 235.0 241 61.4
Misin01G055600 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M009717 1.3e-59 232.6 240 61.7
Zm00001d013100 Zea mays B73 HOM04x5M007573 ORTHO04x5M009717 3.6e-59 231.1 243 60.5
Zm00007a00047457 Zea mays B104 HOM04x5M007573 ORTHO04x5M009717 3.6e-59 231.1 243 60.5
Zm00008a019244 Zea mays PH207 HOM04x5M007573 ORTHO04x5M009717 3.6e-59 231.1 243 60.5
PH01000458G0270 Phyllostachys edulis HOM04x5M007573 ORTHO04x5M009717 3.5e-54 214.5 236 60.6
Sspon.01G0029910-2D Saccharum spontaneum HOM04x5M007573 ORTHO04x5M009717 1.8e-53 212.2 237 57.8
Sspon.01G0029910-1A Saccharum spontaneum HOM04x5M007573 ORTHO04x5M009717 5.1e-53 210.7 237 57.4
Zjn_sc00014.1.g06900.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M007573 ORTHO04x5M009717 4.5e-49 197.6 241 55.6
Zm00001d034380 Zea mays B73 HOM04x5M007573 ORTHO04x5M009717 2.9e-48 194.9 249 53.4
Zm00007a00016215 Zea mays B104 HOM04x5M007573 ORTHO04x5M009717 2.9e-48 194.9 249 53.4
Pgl_GLEAN_10033819 Cenchrus americanus HOM04x5M007573 ORTHO04x5M009717 8.2e-43 176.8 192 59.9
TRITD5Bv1G212160 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 4.5e-41 171.0 237 53.6
TraesCS5B02G429000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 1.0e-40 169.9 237 53.2
HORVU5Hr1G103790 Hordeum vulgare HOM04x5M007573 ORTHO04x5M009717 3.8e-40 167.9 239 51.0
LOC_Os03g57530 Oryza sativa ssp. japonica HOM04x5M007573 ORTHO04x5M009717 7.9e-38 160.2 233 51.5
OsR498G0307179400.01 Oryza sativa ssp. indica HOM04x5M007573 ORTHO04x5M009717 7.9e-38 160.2 233 51.5
Zm00008a005426 Zea mays PH207 HOM04x5M007573 ORTHO04x5M009717 5.7e-36 154.1 187 53.5
TraesCS5A02G427100 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 2.8e-35 151.8 190 55.8
TraesCS5D02G435000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 4.8e-35 151.0 187 55.1
TRITD5Av1G215750 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 8.2e-35 150.2 190 55.3
Bradi1g06250 Brachypodium distachyon HOM04x5M007573 ORTHO04x5M009717 2.2e-32 142.1 235 47.7
LP029224 Lolium perenne HOM04x5M007573 ORTHO04x5M009717 6.7e-29 130.6 222 46.8
LP037141 Lolium perenne HOM04x5M007573 ORTHO04x5M009717 2.4e-26 122.1 237 41.8
TraesCS2A02G248000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 1.7e-24 115.9 254 41.3
PH01249411G0010 Phyllostachys edulis HOM04x5M007573 ORTHO04x5M009717 6.5e-24 114.0 136 57.4
TraesCS5D02G268100 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 4.2e-23 111.3 234 41.9
TraesCS5B02G259000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 5.1e-21 104.4 238 42.0
OB03G43760 Oryza brachyantha HOM04x5M007573 ORTHO04x5M009717 2.2e-19 99.0 168 47.0
Zjn_sc00051.1.g01820.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002876 ORTHO04x5M003544 3.6e-14 81.6 226 36.3
Seita.8G028900 Setaria italica HOM04x5M007573 ORTHO04x5M009717 6.1e-14 80.9 237 33.3
OsR498G0713568600.01 Oryza sativa ssp. indica HOM04x5M007573 ORTHO04x5M009717 1.8e-10 69.3 185 38.9
PEQU_13390 Phalaenopsis equestris HOM04x5M001892 ORTHO04x5M002029 1.1e-07 60.1 113 42.5
Spipo24G0030700 Spirodela polyrhiza HOM04x5M001892 ORTHO04x5M002029 2.5e-07 58.9 122 37.7
ASH_gene10223 Apostasia shenzhenica HOM04x5M001892 ORTHO04x5M002029 2.7e-06 55.5 260 30.0
LOC_Os07g06810 Oryza sativa ssp. japonica HOM04x5M007573 ORTHO04x5M009717 6.1e-06 54.3 170 35.9

Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (0 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (0 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Picea abies (0 genes)
Populus trichocarpa (0 genes)
Saccharum spontaneum (2 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (2 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum turgidum (2 genes)
Vitis vinifera (0 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings