Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Potri.T164400	Populus trichocarpa	HOM04D006231	ORTHO04D008752	5.8e-37	156.0	79	100.0
Potri.010G127200	Populus trichocarpa	HOM04D006231	ORTHO04D008752	5.5e-11	69.7	49	67.3
Cpa.g.sc1.191	Carica papaya	HOM04D006231	ORTHO04D008752	3.9e-09	63.5	49	61.2
Ciclev10031676m.g	Citrus clementina	HOM04D006231	ORTHO04D008752	3.9e-09	63.5	49	63.3
FVE03767	Fragaria vesca	HOM04D006231	ORTHO04D008752	1.9e-08	61.2	57	56.1
HBR2109G042	Hevea brasiliensis	HOM04D006231	ORTHO04D008752	4.3e-08	60.1	42	69.0
Araip.WVQ3P	Arachis ipaensis	HOM04D006231	ORTHO04D008752	7.4e-08	59.3	49	57.1
GSVIVG01011920001	Vitis vinifera	HOM04D006231	ORTHO04D008752	7.4e-08	59.3	49	61.2
Prupe.1G308400	Prunus persica	HOM04D006231	ORTHO04D008752	9.7e-08	58.9	49	61.2
NNU_00518	Nelumbo nucifera	HOM04D006231	ORTHO04D008752	1.3e-07	58.5	45	62.2
COL.COLO4_07899	Corchorus olitorius	HOM04D006231	ORTHO04D008752	1.7e-07	58.2	53	54.7
TCA.TCM_011834	Theobroma cacao	HOM04D006231	ORTHO04D008752	2.2e-07	57.8	49	57.1
C.cajan_45128.g	Cajanus cajan	HOM04D006231	ORTHO04D008752	3.7e-07	57.0	49	59.2
Vradi11g12240	Vigna radiata var. radiata	HOM04D006231	ORTHO04D008752	3.7e-07	57.0	49	59.2
Medtr5g054910	Medicago truncatula	HOM04D006231	ORTHO04D008752	4.8e-07	56.6	49	59.2
RCO.g.28883.000015	Ricinus communis	HOM04D006231	ORTHO04D008752	4.8e-07	56.6	49	57.1
TPR.G38252	Trifolium pratense	HOM04D006231	ORTHO04D008752	4.8e-07	56.6	49	59.2
Zm00001d003404	Zea mays	HOM04D006231	ORTHO04D008752	6.3e-07	56.2	49	53.1
Eucgr.G02336	Eucalyptus grandis	HOM04D006231	ORTHO04D008752	6.3e-07	56.2	49	55.1
Bv6_142220_qyea	Beta vulgaris	HOM04D006231	ORTHO04D008752	6.3e-07	56.2	49	55.1
Glyma.08G260300	Glycine max	HOM04D006231	ORTHO04D008752	1.1e-06	55.5	49	57.1
DCAR_026725	Daucus carota	HOM04D006231	ORTHO04D008752	1.4e-06	55.1	49	55.1
Solyc04g007110.2	Solanum lycopersicum	HOM04D006231	ORTHO04D008752	1.8e-06	54.7	49	55.1
PGSC0003DMG401015876	Solanum tuberosum	HOM04D006231	ORTHO04D008752	1.8e-06	54.7	49	55.1
Manes.14G100000	Manihot esculenta	HOM04D006231	ORTHO04D008752	2.4e-06	54.3	46	58.7
Glyma.20G042600	Glycine max	HOM04D006231	ORTHO04D008752	2.4e-06	54.3	49	55.1
AH005406	Amaranthus hypochondriacus	HOM04D006231	ORTHO04D008752	2.4e-06	54.3	49	53.1
ZJU.LOC107429431	Ziziphus jujuba	HOM04D006231	ORTHO04D008752	3.1e-06	53.9	49	55.1
ZJU.LOC107429505	Ziziphus jujuba	HOM04D006231	ORTHO04D008752	3.1e-06	53.9	49	55.1
Gorai.013G081400	Gossypium raimondii	HOM04D006231	ORTHO04D008752	3.1e-06	53.9	49	57.1
Cc11_g10350	Coffea canephora	HOM04D006231	ORTHO04D008752	5.3e-06	53.1	49	55.1
AUR62035252	Chenopodium quinoa	HOM04D006231	ORTHO04D008752	6.9e-06	52.8	49	51.0
Peaxi162Scf00086g00919	Petunia axillaris	HOM04D006231	ORTHO04D008752	6.9e-06	52.8	50	52.0
AUR62002895	Chenopodium quinoa	HOM04D006231	ORTHO04D008752	6.9e-06	52.8	49	51.0
Migut.L01080	Erythranthe guttata	HOM04D006231	ORTHO04D008752	9.1e-06	52.4	49	51.0
Cla007983.g	Citrullus lanatus	HOM04D006231	ORTHO04D008752	9.1e-06	52.4	49	55.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment