Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
FVE31256	Fragaria vesca	HOM04D003718	ORTHO04D003884	4.4e-306	1052.7	525	100.0
FVE31249	Fragaria vesca	HOM04D003718	ORTHO04D003884	5.6e-35	152.1	140	58.6
FVE31251	Fragaria vesca	HOM04D003807	ORTHO04D004451	1.1e-33	147.9	177	43.5
FVE27342	Fragaria vesca	HOM04D003718	ORTHO04D003884	1.0e-28	131.3	136	47.8
FVE15538	Fragaria vesca	HOM04D003718	ORTHO04D003884	4.7e-26	122.5	136	49.3
FVE13540	Fragaria vesca	HOM04D000263	ORTHO04D000149	5.2e-25	119.0	116	52.6
Pbr040263.2.g	Pyrus bretschneideri	HOM04D003718	ORTHO04D003884	2.0e-24	117.1	112	50.9
Prupe.3G196500	Prunus persica	HOM04D003718	ORTHO04D003884	4.4e-24	115.9	209	35.4
MDO.mRNA.g.4942.5	Malus domestica	HOM04D003718	ORTHO04D003884	2.9e-23	113.2	91	56.0
FVE27570	Fragaria vesca	HOM04D003718	ORTHO04D003884	1.1e-22	111.3	95	55.8
FVE15540	Fragaria vesca	HOM04D003718	ORTHO04D003884	1.7e-20	104.0	155	36.8
ZJU.LOC107433890	Ziziphus jujuba	HOM04D003718	ORTHO04D003884	5.2e-17	92.4	144	34.7
ZJU.LOC107416837	Ziziphus jujuba	HOM04D003718	ORTHO04D003884	5.2e-17	92.4	144	34.7
Manes.12G063700	Manihot esculenta	HOM04D003718	ORTHO04D003884	3.8e-15	86.3	123	35.0
Cucsa.310130	Cucumis sativus L.	HOM04D003718	ORTHO04D003884	4.9e-15	85.9	115	38.3
TCA.TCM_002436	Theobroma cacao	HOM04D000072	ORTHO04D001323	4.9e-15	85.9	126	33.3
C.cajan_27807.g	Cajanus cajan	HOM04D003718	ORTHO04D003884	1.4e-14	84.3	106	38.7
TCA.TCM_002431	Theobroma cacao	HOM04D001573	ORTHO04D006087	3.2e-14	83.2	124	33.9
RCO.g.29732.000011	Ricinus communis	HOM04D003718	ORTHO04D003884	3.2e-14	83.2	121	34.7
Medtr3g082720	Medicago truncatula	HOM04D003718	ORTHO04D003884	9.3e-14	81.6	97	38.1
Cla015698.g	Citrullus lanatus	HOM04D003718	ORTHO04D003884	9.3e-14	81.6	103	40.8
HBR2669G005	Hevea brasiliensis	HOM04D003718	ORTHO04D003884	1.2e-13	81.3	101	36.6
TPR.G40538	Trifolium pratense	HOM04D003718	ORTHO04D003884	1.6e-13	80.9	121	33.1
Ciclev10015675m.g	Citrus clementina	HOM04D003718	ORTHO04D003884	2.1e-13	80.5	114	35.1
DCAR_019672	Daucus carota	HOM04D003718	ORTHO04D003884	2.1e-13	80.5	80	42.5
Glyma.13G007400	Glycine max	HOM04D003718	ORTHO04D003884	2.1e-13	80.5	90	40.0
TPR.G22472	Trifolium pratense	HOM04D003718	ORTHO04D003884	4.6e-13	79.3	102	34.3
Gorai.001G098800	Gossypium raimondii	HOM04D003718	ORTHO04D003884	7.8e-13	78.6	100	36.0
Ca_19237.g	Cicer arietinum	HOM04D003718	ORTHO04D003884	1.7e-12	77.4	95	40.0
Medtr3g082740	Medicago truncatula	HOM04D003718	ORTHO04D003884	3.9e-12	76.3	97	36.1
Potri.002G216900	Populus trichocarpa	HOM04D003718	ORTHO04D003884	5.1e-12	75.9	110	35.5
Peaxi162Scf00802g00028	Petunia axillaris	HOM04D003718	ORTHO04D003884	8.7e-12	75.1	117	37.6
Peaxi162Scf00047g02035	Petunia axillaris	HOM04D003718	ORTHO04D003884	8.7e-12	75.1	94	34.0
Araip.K9BLH	Arachis ipaensis	HOM04D003718	ORTHO04D003884	8.7e-12	75.1	141	30.5
Medtr6g042090	Medicago truncatula	HOM04D003718	ORTHO04D003884	1.1e-11	74.7	122	32.8
Medtr6g042040	Medicago truncatula	HOM04D003718	ORTHO04D003884	1.5e-11	74.3	130	33.1
Solyc07g045320.2	Solanum lycopersicum	HOM04D003718	ORTHO04D003884	1.9e-11	73.9	93	36.6
PGSC0003DMG401004292	Solanum tuberosum	HOM04D003718	ORTHO04D003884	1.9e-11	73.9	107	34.6
NNU_08568	Nelumbo nucifera	HOM04D003718	ORTHO04D003884	9.6e-11	71.6	75	46.7
AUR62029125	Chenopodium quinoa	HOM04D003718	ORTHO04D003884	9.6e-11	71.6	80	41.2
Solyc12g006060.1	Solanum lycopersicum	HOM04D003718	ORTHO04D003884	1.3e-10	71.2	130	30.8
Gorai.007G165400	Gossypium raimondii	HOM04D003718	ORTHO04D003884	1.3e-10	71.2	96	36.5
Migut.L00790	Erythranthe guttata	HOM04D003718	ORTHO04D003884	1.3e-10	71.2	82	37.8
AUR62035876	Chenopodium quinoa	HOM04D003718	ORTHO04D003884	1.6e-10	70.9	80	40.0
Vradi06g08100	Vigna radiata var. radiata	HOM04D003718	ORTHO04D003884	2.1e-10	70.5	126	31.7
AUR62014996	Chenopodium quinoa	HOM04D003718	ORTHO04D003884	2.1e-10	70.5	80	38.8
PGSC0003DMG400017406	Solanum tuberosum	HOM04D003718	ORTHO04D003884	4.8e-10	69.3	128	32.8
AH000124	Amaranthus hypochondriacus	HOM04D003718	ORTHO04D003884	6.2e-10	68.9	66	45.5
CAN.G437.6	Capsicum annuum	HOM04D003718	ORTHO04D003884	1.1e-09	68.2	93	36.6
Glyma.13G186300	Glycine max	HOM04D003718	ORTHO04D003884	2.4e-09	67.0	101	33.7
CAN.G437.9	Capsicum annuum	HOM04D003718	ORTHO04D003884	5.3e-09	65.9	85	36.5
ATR0751G270	Amborella trichopoda	HOM04D003718	ORTHO04D003884	5.3e-09	65.9	80	37.5
Cc00_g01040	Coffea canephora	HOM04D003718	ORTHO04D003884	1.5e-08	64.3	91	31.9
Glyma.15G224000	Glycine max	HOM04D003718	ORTHO04D003884	3.8e-07	59.7	78	30.8
COL.COLO4_19638	Corchorus olitorius	HOM04D003718	ORTHO04D003884	1.1e-06	58.2	74	35.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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