Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
FVE31241	Fragaria vesca	HOM04D001702	ORTHO04D001587	4.2e-187	656.8	317	100.0
FVE18851	Fragaria vesca	HOM04D001702	ORTHO04D001587	5.0e-39	164.9	142	60.6
Pbr021661.1.g	Pyrus bretschneideri	HOM04D001702	ORTHO04D001587	3.6e-21	105.5	146	43.8
MDO.mRNA.g.5421.3	Malus domestica	HOM04D001702	ORTHO04D001587	2.6e-19	99.4	146	42.5
Prupe.6G275400	Prunus persica	HOM04D001702	ORTHO04D001587	1.3e-18	97.1	215	34.0
ZJU.LOC107430841	Ziziphus jujuba	HOM04D001702	ORTHO04D001587	9.2e-17	90.9	146	39.0
GSVIVG01033975001	Vitis vinifera	HOM04D001702	ORTHO04D001587	1.1e-14	84.0	146	39.7
Manes.09G104300	Manihot esculenta	HOM04D001702	ORTHO04D001587	1.5e-14	83.6	164	36.0
RCO.g.29701.000031	Ricinus communis	HOM04D001702	ORTHO04D001587	4.3e-14	82.0	169	35.5
Potri.016G114600	Populus trichocarpa	HOM04D001702	ORTHO04D001587	1.6e-13	80.1	170	34.1
Pbr042894.1.g	Pyrus bretschneideri	HOM04D001702	ORTHO04D001587	2.8e-13	79.3	202	32.2
Potri.006G099401	Populus trichocarpa	HOM04D001702	ORTHO04D001587	3.6e-13	79.0	170	32.9
TCA.TCM_021715	Theobroma cacao	HOM04D001702	ORTHO04D001587	2.3e-12	76.3	139	37.4
COL.COLO4_14550	Corchorus olitorius	HOM04D001702	ORTHO04D001587	3.1e-12	75.9	55	65.5
HBR2567G019	Hevea brasiliensis	HOM04D001702	ORTHO04D001587	5.2e-12	75.1	164	32.9
Cucsa.067160	Cucumis sativus L.	HOM04D001702	ORTHO04D001587	5.8e-11	71.6	141	34.8
Migut.J00183	Erythranthe guttata	HOM04D001702	ORTHO04D001587	9.9e-11	70.9	204	28.4
Achn152621	Actinidia chinensis	HOM04D001702	ORTHO04D001587	2.2e-10	69.7	55	60.0
Ciclev10011105m.g	Citrus clementina	HOM04D001702	ORTHO04D001587	2.9e-10	69.3	55	60.0
TPR.G8126	Trifolium pratense	HOM04D001702	ORTHO04D001587	4.9e-10	68.6	150	35.3
Cla018113.g	Citrullus lanatus	HOM04D001702	ORTHO04D001587	4.9e-10	68.6	142	35.2
MELO3C003243	Cucumis melo	HOM04D001702	ORTHO04D001587	8.4e-10	67.8	142	34.5
Cpa.g.sc163.16	Carica papaya	HOM04D001702	ORTHO04D001587	8.4e-10	67.8	151	32.5
THA.LOC104816651	Tarenaya hassleriana	HOM04D001702	ORTHO04D001587	8.4e-10	67.8	157	30.6
Eucgr.K02986	Eucalyptus grandis	HOM04D001702	ORTHO04D001587	8.4e-10	67.8	156	33.3
TPR.G31896	Trifolium pratense	HOM04D001702	ORTHO04D001587	2.4e-09	66.2	150	34.7
Tp6g40600	Schrenkiella parvula	HOM04D001702	ORTHO04D001587	2.4e-09	66.2	189	31.2
Cc06_g01480	Coffea canephora	HOM04D001702	ORTHO04D001587	4.1e-09	65.5	144	34.7
CAN.G772.2	Capsicum annuum	HOM04D001702	ORTHO04D001587	4.1e-09	65.5	51	60.8
Araip.AYG40	Arachis ipaensis	HOM04D001702	ORTHO04D001587	4.1e-09	65.5	148	34.5
Solyc09g014440.2	Solanum lycopersicum	HOM04D001702	ORTHO04D001587	4.1e-09	65.5	142	33.1
NNU_18544	Nelumbo nucifera	HOM04D001702	ORTHO04D001587	5.4e-09	65.1	55	58.2
AUR62043096	Chenopodium quinoa	HOM04D001702	ORTHO04D001587	7.1e-09	64.7	52	57.7
AL6G10900	Arabidopsis lyrata	HOM04D001702	ORTHO04D001587	7.1e-09	64.7	51	58.8
AH014344	Amaranthus hypochondriacus	HOM04D001702	ORTHO04D001587	1.2e-08	63.9	60	53.3
Carubv10000279m.g	Capsella rubella	HOM04D001702	ORTHO04D001587	1.6e-08	63.5	51	58.8
AT5G01270	Arabidopsis thaliana	HOM04D001702	ORTHO04D001587	1.6e-08	63.5	189	30.2
Brara.C00039	Brassica rapa	HOM04D001702	ORTHO04D001587	3.5e-08	62.4	55	60.0
Bo3g001510	Brassica oleracea	HOM04D001702	ORTHO04D001587	7.8e-08	61.2	55	60.0
Glyma.18G199400	Glycine max	HOM04D001702	ORTHO04D001587	7.8e-08	61.2	148	34.5
Medtr7g067540	Medicago truncatula	HOM04D001702	ORTHO04D001587	1.3e-07	60.5	159	35.8
FVE21777	Fragaria vesca	HOM04D000527	ORTHO04D000470	1.3e-07	60.5	128	35.2
Peaxi162Scf00141g00338	Petunia axillaris	HOM04D001702	ORTHO04D001587	2.3e-07	59.7	144	31.2
Bv_014360_uiwu	Beta vulgaris	HOM04D001702	ORTHO04D001587	2.3e-07	59.7	44	61.4
Eucgr.K02984	Eucalyptus grandis	HOM04D001702	ORTHO04D001587	5.1e-07	58.5	51	56.9
Glyma.07G148100	Glycine max	HOM04D001702	ORTHO04D001587	5.1e-07	58.5	52	59.6
Ca_19334.g	Cicer arietinum	HOM04D001702	ORTHO04D001587	8.6e-07	57.8	143	34.3
MDO.mRNA.g.1807.14	Malus domestica	HOM04D001702	ORTHO04D001587	8.6e-07	57.8	45	60.0
DCAR_028839	Daucus carota	HOM04D001702	ORTHO04D001587	1.1e-06	57.4	54	50.0
Vradi08g04460	Vigna radiata var. radiata	HOM04D001702	ORTHO04D001587	1.1e-06	57.4	52	57.7
LOC_Os01g63820	Oryza sativa ssp. japonica	HOM04D001702	ORTHO04D001587	4.3e-06	55.5	51	47.1
UGI.Scf00094.7619	Utricularia gibba	HOM04D001702	ORTHO04D001587	5.6e-06	55.1	52	51.9
Eucgr.K02985	Eucalyptus grandis	HOM04D001702	ORTHO04D001587	5.6e-06	55.1	54	48.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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