Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Araip.2Q3DD	Arachis ipaensis	HOM04D002144	ORTHO04D039708	1.0e-38	161.8	76	100.0
Araip.ZB3XA	Arachis ipaensis	HOM04D002144	ORTHO04D002615	2.4e-08	60.8	31	87.1
Gorai.006G172100	Gossypium raimondii	HOM04D002144	ORTHO04D002615	6.0e-07	56.2	31	77.4
Bv5_111740_owsj	Beta vulgaris	HOM04D002144	ORTHO04D002615	7.9e-07	55.8	30	76.7
THA.LOC104823264	Tarenaya hassleriana	HOM04D002144	ORTHO04D002615	7.9e-07	55.8	31	74.2
Glyma.18G182000	Glycine max	HOM04D002144	ORTHO04D002615	7.9e-07	55.8	31	74.2
COL.COLO4_14786	Corchorus olitorius	HOM04D002144	ORTHO04D002615	7.9e-07	55.8	31	77.4
Glyma.07G132900	Glycine max	HOM04D002144	ORTHO04D002615	1.3e-06	55.1	31	77.4
TCA.TCM_021922	Theobroma cacao	HOM04D002144	ORTHO04D002615	1.3e-06	55.1	31	74.2
Ca_21134.g	Cicer arietinum	HOM04D002144	ORTHO04D002615	1.3e-06	55.1	31	77.4
AL6G11320	Arabidopsis lyrata	HOM04D002144	ORTHO04D002615	1.3e-06	55.1	31	74.2
NNU_03578	Nelumbo nucifera	HOM04D002144	ORTHO04D002615	2.3e-06	54.3	31	71.0
C.cajan_32694.g	Cajanus cajan	HOM04D002144	ORTHO04D002615	2.3e-06	54.3	31	71.0
Eucgr.B02352	Eucalyptus grandis	HOM04D002144	ORTHO04D002615	2.3e-06	54.3	31	71.0
Cpa.g.sc169.26	Carica papaya	HOM04D002144	ORTHO04D002615	3.0e-06	53.9	31	67.7
GSVIVG01034158001	Vitis vinifera	HOM04D002144	ORTHO04D002615	3.9e-06	53.5	31	71.0
Migut.L01951	Erythranthe guttata	HOM04D002144	ORTHO04D002615	3.9e-06	53.5	31	71.0
ATR0763G023	Amborella trichopoda	HOM04D002144	ORTHO04D002615	5.1e-06	53.1	31	67.7
Vradi0111s00020	Vigna radiata var. radiata	HOM04D002144	ORTHO04D002615	5.1e-06	53.1	31	71.0
UGI.Scf00133.9298	Utricularia gibba	HOM04D002144	ORTHO04D002615	5.1e-06	53.1	31	67.7
Eucgr.A01280	Eucalyptus grandis	HOM04D002144	ORTHO04D002615	5.1e-06	53.1	30	73.3
Zm00001d028606	Zea mays	HOM04D002144	ORTHO04D002615	5.1e-06	53.1	31	74.2
THA.LOC104816253	Tarenaya hassleriana	HOM04D002144	ORTHO04D002615	5.1e-06	53.1	31	67.7
Potri.006G086400	Populus trichocarpa	HOM04D002144	ORTHO04D002615	5.1e-06	53.1	50	58.0
Carubv10000934m.g	Capsella rubella	HOM04D002144	ORTHO04D002615	6.7e-06	52.8	31	71.0
Brara.E03098	Brassica rapa	HOM04D002144	ORTHO04D002615	6.7e-06	52.8	31	67.7
Bo5g139390	Brassica oleracea	HOM04D002144	ORTHO04D002615	6.7e-06	52.8	31	67.7
Achn040181	Actinidia chinensis	HOM04D002144	ORTHO04D002615	8.7e-06	52.4	31	67.7
MELO3C020621	Cucumis melo	HOM04D002144	ORTHO04D002615	8.7e-06	52.4	30	70.0
Cucsa.117800	Cucumis sativus L.	HOM04D002144	ORTHO04D002615	8.7e-06	52.4	30	70.0
Cla008230.g	Citrullus lanatus	HOM04D002144	ORTHO04D002615	8.7e-06	52.4	30	70.0

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment