Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G29290	Arabidopsis thaliana	HOM04D006697	ORTHO04D008786	4.3e-51	203.4	108	100.0
AL1G43080	Arabidopsis lyrata	HOM04D006697	ORTHO04D008786	1.7e-47	191.4	108	92.6
Carubv10010707m.g	Capsella rubella	HOM04D006697	ORTHO04D008786	1.0e-44	182.2	109	89.0
Brara.I02898	Brassica rapa	HOM04D006697	ORTHO04D008786	2.9e-39	164.1	108	82.4
Brara.G00767	Brassica rapa	HOM04D006697	ORTHO04D008786	5.0e-39	163.3	108	83.3
Bo5g058620	Brassica oleracea	HOM04D006697	ORTHO04D008786	5.0e-39	163.3	108	83.3
Bo7g045550	Brassica oleracea	HOM04D006697	ORTHO04D008786	5.0e-39	163.3	109	83.5
Tp1g25220	Schrenkiella parvula	HOM04D006697	ORTHO04D008786	7.2e-38	159.5	108	83.3
Bo3g143920	Brassica oleracea	HOM04D006697	ORTHO04D008786	2.6e-35	151.0	108	76.9
Brara.H01955	Brassica rapa	HOM04D006697	ORTHO04D008786	7.4e-35	149.4	108	76.9
THA.LOC104820608	Tarenaya hassleriana	HOM04D006697	ORTHO04D008786	6.5e-15	83.2	62	64.5
Migut.H01411	Erythranthe guttata	HOM04D006697	ORTHO04D008786	5.5e-14	80.1	101	50.5
CAN.G411.50	Capsicum annuum	HOM04D006697	ORTHO04D008786	1.2e-13	79.0	101	46.5
COL.COLO4_31233	Corchorus olitorius	HOM04D006697	ORTHO04D008786	4.7e-13	77.0	101	44.6
PGSC0003DMG400028485	Solanum tuberosum	HOM04D006697	ORTHO04D008786	1.0e-12	75.9	101	46.5
Potri.004G061300	Populus trichocarpa	HOM04D006697	ORTHO04D008786	1.4e-12	75.5	98	45.9
TCA.TCM_029645	Theobroma cacao	HOM04D006697	ORTHO04D008786	1.4e-12	75.5	99	44.4
Prupe.4G067000	Prunus persica	HOM04D006697	ORTHO04D008786	5.2e-12	73.6	99	47.5
ZJU.LOC107412223	Ziziphus jujuba	HOM04D006697	ORTHO04D008786	5.2e-12	73.6	96	43.8
Cc02_g15600	Coffea canephora	HOM04D006697	ORTHO04D008786	8.9e-12	72.8	102	47.1
FVE29711	Fragaria vesca	HOM04D006697	ORTHO04D008786	1.5e-11	72.0	99	46.5
Manes.16G042800	Manihot esculenta	HOM04D006697	ORTHO04D008786	3.4e-11	70.9	96	44.8
DCAR_005145	Daucus carota	HOM04D006697	ORTHO04D008786	3.4e-11	70.9	50	64.0
Pbr016099.1.g	Pyrus bretschneideri	HOM04D006697	ORTHO04D008786	3.4e-11	70.9	98	49.0
Gorai.009G160500	Gossypium raimondii	HOM04D006697	ORTHO04D008786	4.4e-11	70.5	101	47.5
Pbr000527.1.g	Pyrus bretschneideri	HOM04D006697	ORTHO04D008786	5.7e-11	70.1	87	56.3
Ciclev10018148m.g	Citrus clementina	HOM04D006697	ORTHO04D008786	1.3e-10	68.9	97	46.4
Eucgr.D00466	Eucalyptus grandis	HOM04D006697	ORTHO04D008786	1.3e-10	68.9	101	41.6
Glyma.05G161100	Glycine max	HOM04D006697	ORTHO04D008786	1.4e-09	65.5	51	66.7
C.cajan_37025.g	Cajanus cajan	HOM04D006697	ORTHO04D008786	1.8e-09	65.1	101	44.6
RCO.g.30026.000030	Ricinus communis	HOM04D006697	ORTHO04D008786	2.4e-09	64.7	101	39.6
Manes.17G059300	Manihot esculenta	HOM04D006697	ORTHO04D008786	2.4e-09	64.7	103	41.7
Potri.011G070500	Populus trichocarpa	HOM04D006697	ORTHO04D008786	2.4e-09	64.7	99	40.4
Glyma.08G118500	Glycine max	HOM04D006697	ORTHO04D008786	4.1e-09	63.9	99	43.4
DCAR_027980	Daucus carota	HOM04D006697	ORTHO04D008786	4.1e-09	63.9	98	38.8
Achn125141	Actinidia chinensis	HOM04D006697	ORTHO04D008786	4.1e-09	63.9	65	50.8
Medtr8g087390	Medicago truncatula	HOM04D006697	ORTHO04D008786	1.2e-08	62.4	97	42.3
Glyma.13G226600	Glycine max	HOM04D006697	ORTHO04D008786	1.2e-08	62.4	97	43.3
TPR.G6728	Trifolium pratense	HOM04D006697	ORTHO04D008786	1.6e-08	62.0	97	43.3
Migut.M01008	Erythranthe guttata	HOM04D006697	ORTHO04D008786	1.6e-08	62.0	50	62.0
Ca_08617.g	Cicer arietinum	HOM04D006697	ORTHO04D008786	2.7e-08	61.2	97	44.3
DCAR_027979	Daucus carota	HOM04D006697	ORTHO04D008786	3.5e-08	60.8	50	58.0
Gorai.010G161500	Gossypium raimondii	HOM04D006697	ORTHO04D008786	7.8e-08	59.7	100	42.0
Ca_00422.g	Cicer arietinum	HOM04D006697	ORTHO04D008786	1.0e-07	59.3	97	40.2
Araip.LL42G	Arachis ipaensis	HOM04D006697	ORTHO04D008786	1.0e-07	59.3	99	41.4
C.cajan_29536.g	Cajanus cajan	HOM04D006697	ORTHO04D008786	1.0e-07	59.3	96	40.6
MDO.mRNA.g.71.34	Malus domestica	HOM04D006697	ORTHO04D008786	1.3e-07	58.9	88	47.7
NNU_25701	Nelumbo nucifera	HOM04D006697	ORTHO04D008786	2.5e-06	54.7	88	39.8
Brara.H02490	Brassica rapa	HOM04D010734	ORTHO04D013091	4.3e-06	53.9	60	51.7
Cla009708.g	Citrullus lanatus	HOM04D006697	ORTHO04D008786	4.3e-06	53.9	53	56.6
Medtr2g016800	Medicago truncatula	HOM04D006697	ORTHO04D008786	9.5e-06	52.8	101	36.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment