Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
AL7G15100	Arabidopsis lyrata	HOM04D008743	ORTHO04D003716	7.3e-148	526.6	353	100.0
AT4G35940	Arabidopsis thaliana	HOM04D008743	ORTHO04D003716	2.2e-120	435.3	379	77.6
Carubv10005187m.g	Capsella rubella	HOM04D008743	ORTHO04D003716	1.9e-108	395.6	366	70.8
Tp7g33720	Schrenkiella parvula	HOM04D008743	ORTHO04D003716	5.0e-80	301.2	377	66.3
Brara.K01335	Brassica rapa	HOM04D008743	ORTHO04D003716	2.0e-76	289.3	372	60.5
Bo1g006080	Brassica oleracea	HOM04D008743	ORTHO04D003716	1.3e-64	250.0	359	61.6
Bo7g117700	Brassica oleracea	HOM04D008743	ORTHO04D003716	4.3e-55	218.4	368	58.4
Brara.A00252	Brassica rapa	HOM04D008743	ORTHO04D003716	1.2e-52	210.3	359	61.8
THA.LOC104804274	Tarenaya hassleriana	HOM04D008743	ORTHO04D003716	3.2e-42	175.6	375	48.0
THA.LOC104807504	Tarenaya hassleriana	HOM04D008743	ORTHO04D003716	9.9e-36	154.1	373	48.8
AT2G17787	Arabidopsis thaliana	HOM04D008743	ORTHO04D003716	4.1e-34	148.7	393	42.2
AL3G50810	Arabidopsis lyrata	HOM04D008743	ORTHO04D003716	3.6e-30	135.6	387	46.0
Carubv10014159m.g	Capsella rubella	HOM04D008743	ORTHO04D003716	6.9e-29	131.3	393	41.0
COL.COLO4_22466	Corchorus olitorius	HOM04D008743	ORTHO04D003716	3.4e-28	129.0	362	39.8
Gorai.003G007900	Gossypium raimondii	HOM04D008743	ORTHO04D003716	9.9e-28	127.5	369	50.1
Brara.G00238	Brassica rapa	HOM04D008743	ORTHO04D003716	5.4e-26	121.7	371	43.1
Bo7g014020	Brassica oleracea	HOM04D008743	ORTHO04D003716	7.1e-26	121.3	367	35.4
Bo9g024730	Brassica oleracea	HOM04D008743	ORTHO04D003716	4.8e-22	108.6	369	38.5
Brara.I01045	Brassica rapa	HOM04D008743	ORTHO04D003716	3.4e-20	102.4	269	32.0
Gorai.008G208400	Gossypium raimondii	HOM04D008743	ORTHO04D003716	3.1e-13	79.3	169	38.5
Eucgr.I02328	Eucalyptus grandis	HOM04D007385	ORTHO04D003716	9.0e-13	77.8	366	40.7
PGSC0003DMG400009946	Solanum tuberosum	HOM04D007385	ORTHO04D003716	2.0e-12	76.6	362	32.9
Gorai.008G131100	Gossypium raimondii	HOM04D007385	ORTHO04D003716	1.3e-11	73.9	266	32.7
NNU_18425	Nelumbo nucifera	HOM04D007385	ORTHO04D003716	2.9e-11	72.8	263	29.7
CAN.G311.49	Capsicum annuum	HOM04D007385	ORTHO04D003716	1.1e-10	70.9	361	31.9
Potri.002G019200	Populus trichocarpa	HOM04D007385	ORTHO04D003716	3.5e-09	65.9	189	30.7
Ciclev10025767m.g	Citrus clementina	HOM04D008743	ORTHO04D003716	4.6e-09	65.5	309	28.2
Cc10_g01420	Coffea canephora	HOM04D007385	ORTHO04D003716	6.0e-09	65.1	362	32.9
Pbr034815.1.g	Pyrus bretschneideri	HOM04D007385	ORTHO04D003716	7.9e-09	64.7	130	35.4
RCO.g.30170.000669	Ricinus communis	HOM04D007385	ORTHO04D003716	5.1e-08	62.0	361	28.5
Pbr023298.1.g	Pyrus bretschneideri	HOM04D007385	ORTHO04D003716	2.5e-07	59.7	90	35.6
Achn095751	Actinidia chinensis	HOM04D007385	ORTHO04D003716	3.3e-07	59.3	272	26.5
Ciclev10002009m.g	Citrus clementina	HOM04D007385	ORTHO04D003716	4.3e-07	58.9	187	26.2
Migut.C00862	Erythranthe guttata	HOM04D007385	ORTHO04D003716	5.6e-07	58.5	372	36.6
HBR3358G018	Hevea brasiliensis	HOM04D007385	ORTHO04D003716	9.6e-07	57.8	80	38.8
Solyc04g081730.2	Solanum lycopersicum	HOM04D007385	ORTHO04D003716	1.3e-06	57.4	361	29.4
Glyma.17G259300	Glycine max	HOM04D010981	ORTHO04D003716	2.8e-06	56.2	63	44.4
Manes.18G011000	Manihot esculenta	HOM04D007385	ORTHO04D003716	6.2e-06	55.1	77	40.3
MDO.mRNA.g.1617.62	Malus domestica	HOM04D007385	ORTHO04D003716	8.2e-06	54.7	82	40.2

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment