Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00208G00570	Physcomitrella patens	2e-90	265	125	100.00
PP00489G00140	Physcomitrella patens	1e-27	109	55	87.27
PP00001G00790	Physcomitrella patens	2e-26	100	55	83.64
PP00360G00170	Physcomitrella patens	9e-26	100	55	85.45
PP00496G00080	Physcomitrella patens	1e-25	103	55	85.45
PP00211G00010	Physcomitrella patens	1e-25	101	55	83.64
PP00208G00300	Physcomitrella patens	7e-25	96.7	54	83.33
PP00229G00380	Physcomitrella patens	8e-25	101	82	64.63
PP00251G00020	Physcomitrella patens	2e-24	102	66	75.76
PP00131G00100	Physcomitrella patens	2e-24	102	82	65.85
PP00066G00950	Physcomitrella patens	2e-24	102	82	65.85
PP00129G00700	Physcomitrella patens	3e-24	100	82	63.41
PP00332G00080	Physcomitrella patens	3e-24	96.3	55	80.00
PP00210G00010	Physcomitrella patens	5e-24	99.0	55	81.82
PP00613G00070	Physcomitrella patens	5e-24	99.0	82	63.41
PP00471G00020	Physcomitrella patens	7e-24	99.0	55	80.00
PP00132G00470	Physcomitrella patens	3e-23	92.4	55	78.18
PP00176G00030	Physcomitrella patens	5e-22	96.3	54	83.33
PP00117G00800	Physcomitrella patens	6e-21	89.0	54	74.07
ATR_00056G00740	Amborella trichopoda	1e-20	91.7	81	56.79
OS01G10150	Oryza sativa	1e-20	91.7	81	55.56
PP00039G00180	Physcomitrella patens	2e-20	88.2	62	69.35
OS05G11140	Oryza sativa	3e-19	87.8	81	54.32
ATR_00078G01780	Amborella trichopoda	5e-19	87.0	82	57.32
OS01G54100	Oryza sativa	8e-19	86.3	80	53.75
PP00039G00050	Physcomitrella patens	1e-18	81.6	52	75.00
PP00039G00150	Physcomitrella patens	2e-18	82.8	55	69.09
AT2G25760	Arabidopsis thaliana	3e-18	85.1	80	52.50
OS01G56580	Oryza sativa	3e-18	84.7	61	62.30
OS07G07560	Oryza sativa	4e-18	84.3	55	70.91
OS03G57940	Oryza sativa	5e-18	84.0	82	54.88
AT3G03940	Arabidopsis thaliana	7e-18	84.0	82	53.66
AT5G18190	Arabidopsis thaliana	7e-18	84.0	61	67.21
AC00G23780	Asterochloris sp. Cgr-DA1pho v2.0	2e-17	82.4	90	50.00
CR16G05270	Chlamydomonas reinhardtii	5e-17	81.3	59	62.71
VC00G78160	Volvox carteri	5e-17	80.9	59	62.71
CV00G41480	Coccomyxa subellipsoidea C-169	7e-17	80.5	88	51.14
CNC64A_004G04950	Chlorella sp NC64A	4e-16	78.6	59	59.32
ATR_00024G01320	Amborella trichopoda	7e-16	78.2	80	50.00
PP00208G00160	Physcomitrella patens	8e-16	76.6	43	74.42
AT3G13670	Arabidopsis thaliana	2e-15	76.6	61	59.02
PI00G48380	Picochlorum sp. SENEW3 (SE3)	6e-15	75.1	58	56.90
PP00039G00120	Physcomitrella patens	7e-15	71.6	96	42.71
RCC4223.15g01080	Picochlorum_RCC4223	8e-15	74.7	58	56.90
MP03G08100	Micromonas pusilla strain CCMP1545	2e-14	73.9	58	58.62
MRCC299_05G01370	Micromonas sp RCC299	2e-14	73.6	58	58.62
AP00G54810	Auxenochlorella protothecoides	2e-14	73.6	60	56.67
PP00039G00130	Physcomitrella patens	3e-14	71.2	45	71.11
OL02G01140	Ostreococcus lucimarinus	5e-14	72.4	58	56.90
OT_02G03460	Ostreococcus tauri	6e-14	72.0	58	55.17
ORCC809_02G03800	Ostreococcus sp RCC809	6e-14	72.0	58	55.17
AT3G03930	Arabidopsis thaliana	2e-13	68.6	62	51.61
OM_04G04510	Ostreococcus mediterraneus	3e-13	70.1	59	52.54
BPRRCC1105_03G02050	Bathycoccus prasinos	1e-12	68.2	58	53.45
HE0000G05520	Helicosporidium sp.	9e-12	63.9	58	53.45
VC00G68260	Volvox carteri	1e-10	62.4	56	51.79
CR06G09250	Chlamydomonas reinhardtii	1e-10	62.4	56	51.79
PP00039G00100	Physcomitrella patens	4e-10	58.5	88	40.91
AC00G84950	Asterochloris sp. Cgr-DA1pho v2.0	4e-09	58.2	57	43.86
PP00096G01110	Physcomitrella patens	9e-09	54.7	34	73.53
PP00039G00090	Physcomitrella patens	1e-08	53.9	39	64.10
AP00G03350	Auxenochlorella protothecoides	1e-08	56.2	80	40.00
CV00G53660	Coccomyxa subellipsoidea C-169	2e-08	55.8	70	40.00
PP00210G00120	Physcomitrella patens	8e-08	51.6	56	48.21
PP01655G00020	Physcomitrella patens	2e-07	50.1	67	46.27
PP00360G00180	Physcomitrella patens	2e-07	52.0	23	86.96
PP00117G00890	Physcomitrella patens	2e-07	50.1	57	49.12
HE0000G20190	Helicosporidium sp.	5e-06	48.5	53	41.51

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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