Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00208G00300	Physcomitrella patens	3e-74	222	108	100.00
PP00360G00170	Physcomitrella patens	2e-61	191	112	82.14
PP00332G00080	Physcomitrella patens	2e-59	186	117	76.07
PP00117G00800	Physcomitrella patens	9e-55	176	113	74.34
PP00176G00030	Physcomitrella patens	9e-53	182	112	75.00
PP00039G00150	Physcomitrella patens	2e-49	164	120	66.67
PP00039G00130	Physcomitrella patens	6e-44	150	106	69.81
PP00229G00380	Physcomitrella patens	4e-41	145	133	55.64
PP00489G00140	Physcomitrella patens	3e-39	140	70	88.57
PP00001G00790	Physcomitrella patens	4e-39	132	75	80.00
PP00496G00080	Physcomitrella patens	5e-39	138	70	87.14
PP00039G00180	Physcomitrella patens	2e-38	135	113	60.18
PP00471G00020	Physcomitrella patens	2e-38	138	70	85.71
PP00251G00020	Physcomitrella patens	7e-38	138	70	87.14
PP00066G00950	Physcomitrella patens	3e-37	138	147	50.34
PP00131G00100	Physcomitrella patens	3e-37	138	147	50.34
PP00210G00010	Physcomitrella patens	4e-37	134	70	82.86
PP00132G00470	Physcomitrella patens	5e-37	127	70	81.43
PP00613G00070	Physcomitrella patens	5e-37	134	70	82.86
PP00129G00700	Physcomitrella patens	9e-34	125	70	80.00
PP00211G00010	Physcomitrella patens	1e-33	121	69	78.26
PP00208G00160	Physcomitrella patens	2e-32	122	118	52.54
PP00039G00050	Physcomitrella patens	3e-30	111	67	76.12
ATR_00056G00740	Amborella trichopoda	1e-29	116	147	41.50
OS01G10150	Oryza sativa	4e-29	114	146	41.10
OS05G11140	Oryza sativa	7e-28	111	147	39.46
OS01G54100	Oryza sativa	2e-27	110	146	38.36
ATR_00078G01780	Amborella trichopoda	1e-26	108	143	41.96
AT2G25760	Arabidopsis thaliana	3e-26	107	146	38.36
ATR_00024G01320	Amborella trichopoda	1e-25	105	147	38.78
PP00208G00570	Physcomitrella patens	6e-25	96.7	54	83.33
AT3G13670	Arabidopsis thaliana	2e-24	101	147	38.78
OS07G07560	Oryza sativa	2e-24	101	140	42.14
AT3G03940	Arabidopsis thaliana	4e-23	98.2	143	38.46
AT5G18190	Arabidopsis thaliana	9e-23	97.1	143	39.86
OS03G57940	Oryza sativa	2e-22	96.3	143	40.56
OS01G56580	Oryza sativa	2e-22	96.3	143	37.06
PP00096G01110	Physcomitrella patens	5e-19	82.8	114	43.86
PP01655G00010	Physcomitrella patens	2e-18	79.3	102	45.10
CV00G41480	Coccomyxa subellipsoidea C-169	2e-17	81.6	132	37.12
VC00G78160	Volvox carteri	3e-17	80.9	143	34.27
CR16G05270	Chlamydomonas reinhardtii	6e-17	80.1	143	34.27
AC00G23780	Asterochloris sp. Cgr-DA1pho v2.0	9e-17	79.7	144	32.64
CNC64A_004G04950	Chlorella sp NC64A	2e-16	79.0	145	32.41
MP03G08100	Micromonas pusilla strain CCMP1545	2e-15	75.9	136	32.35
MRCC299_05G01370	Micromonas sp RCC299	6e-15	74.3	138	31.88
BPRRCC1105_03G02050	Bathycoccus prasinos	9e-15	73.9	146	30.14
CR06G09250	Chlamydomonas reinhardtii	1e-14	73.6	144	33.33
OM_04G04510	Ostreococcus mediterraneus	1e-14	73.2	137	31.39
VC00G68260	Volvox carteri	2e-14	72.8	63	53.97
RCC4223.15g01080	Picochlorum_RCC4223	3e-14	72.4	139	30.22
AP00G54810	Auxenochlorella protothecoides	6e-14	71.2	55	56.36
OT_02G03460	Ostreococcus tauri	9e-14	70.9	137	29.93
PI00G48380	Picochlorum sp. SENEW3 (SE3)	1e-13	70.9	55	52.73
AT3G03930	Arabidopsis thaliana	1e-13	68.9	68	48.53
ORCC809_02G03800	Ostreococcus sp RCC809	2e-13	70.1	137	29.93
PP00117G00860	Physcomitrella patens	2e-13	67.4	36	83.33
OL02G01140	Ostreococcus lucimarinus	3e-13	69.3	55	54.55
HE0000G05520	Helicosporidium sp.	3e-12	64.7	77	45.45
PP00039G00100	Physcomitrella patens	2e-10	58.9	38	71.05
AP00G03350	Auxenochlorella protothecoides	9e-10	59.3	144	28.47
AC00G84950	Asterochloris sp. Cgr-DA1pho v2.0	1e-09	58.9	52	50.00
CV00G53660	Coccomyxa subellipsoidea C-169	3e-08	55.1	64	43.75
HE0000G20190	Helicosporidium sp.	1e-06	50.1	52	42.31

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment