Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00089G01080	Physcomitrella patens	0.0	1434	698	100.00
PP00224G00220	Physcomitrella patens	0.0	1331	698	91.98
PP00162G00740	Physcomitrella patens	0.0	1066	702	74.07
PP00019G01110	Physcomitrella patens	0.0	1055	702	73.08
PP00373G00150	Physcomitrella patens	0.0	1050	702	73.22
PP00015G00680	Physcomitrella patens	0.0	948	704	68.04
PP00164G00010	Physcomitrella patens	0.0	927	704	67.33
ATR_00019G01680	Amborella trichopoda	0.0	910	699	65.24
AT2G24630	Arabidopsis thaliana	0.0	902	700	64.14
AT4G31590	Arabidopsis thaliana	0.0	892	700	64.14
ATR_00065G00270	Amborella trichopoda	0.0	879	712	64.33
OS08G15420	Oryza sativa	0.0	823	748	57.62
AT4G07960	Arabidopsis thaliana	0.0	816	719	62.45
ATR_00013G02120	Amborella trichopoda	0.0	803	679	61.86
AT3G07330	Arabidopsis thaliana	0.0	799	697	57.96
OS07G03260	Oryza sativa	0.0	796	685	61.75
AT3G28180	Arabidopsis thaliana	0.0	794	693	60.46
OS09G25900	Oryza sativa	0.0	793	694	62.54
OS05G43530	Oryza sativa	0.0	782	677	62.33
OS01G56130	Oryza sativa	0.0	773	690	61.45
OS03G56060	Oryza sativa	0.0	690	469	74.41
ATR_00040G02570	Amborella trichopoda	1e-143	437	539	42.30
PP00065G00990	Physcomitrella patens	4e-143	436	541	41.77
PP00036G01070	Physcomitrella patens	6e-143	436	545	40.92
PP00036G00370	Physcomitrella patens	3e-142	434	541	41.77
AT5G03760	Arabidopsis thaliana	4e-139	426	536	40.67
AT5G22740	Arabidopsis thaliana	2e-138	424	547	41.13
OS02G09930	Oryza sativa	5e-138	422	552	40.04
AT1G23480	Arabidopsis thaliana	1e-133	412	540	40.56
OS06G42020	Oryza sativa	2e-132	408	556	37.59
AT1G24070	Arabidopsis thaliana	3e-132	409	535	39.07
AT4G13410	Arabidopsis thaliana	4e-132	408	461	43.17
AT2G35650	Arabidopsis thaliana	3e-131	406	431	45.94
OS03G07350	Oryza sativa	3e-130	403	474	41.77
OS07G43710	Oryza sativa	2e-129	402	547	39.12
OS08G33740	Oryza sativa	1e-128	400	498	40.16
AT3G56000	Arabidopsis thaliana	2e-127	396	542	39.11
AT5G16190	Arabidopsis thaliana	2e-126	390	481	41.16
OS03G26044	Oryza sativa	3e-125	391	552	38.77
OS10G26630	Oryza sativa	2e-124	388	478	41.42
OS02G51060	Oryza sativa	2e-123	385	552	36.78
MRCC299_10G04230	Micromonas sp RCC299	3e-123	383	521	39.92
MP16G01280	Micromonas pusilla strain CCMP1545	4e-122	380	500	39.60
OM_17G00960	Ostreococcus mediterraneus	1e-119	377	538	37.55
BPRRCC1105_06G01240	Bathycoccus prasinos	5e-117	372	448	42.41
PI00G51280	Picochlorum sp. SENEW3 (SE3)	2e-115	367	435	41.61
OT_17G00830	Ostreococcus tauri	8e-115	362	427	41.69
AP00G21430	Auxenochlorella protothecoides	1e-114	365	546	38.10
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	2e-114	362	538	36.43
ATR_00072G01360	Amborella trichopoda	2e-113	352	304	53.62
RCC4223.04g03450	Picochlorum_RCC4223	6e-113	361	438	40.18
CV00G12800	Coccomyxa subellipsoidea C-169	4e-112	357	522	36.02
HE0000G41170	Helicosporidium sp.	3e-109	351	549	36.79
OL16G00900	Ostreococcus lucimarinus	6e-108	344	425	40.94
CV00G12810	Coccomyxa subellipsoidea C-169	1e-106	338	365	43.29
AT4G16590	Arabidopsis thaliana	3e-105	333	431	39.91
OS06G12460	Oryza sativa	3e-102	332	422	41.47
ORCC809_16G01780	Ostreococcus sp RCC809	1e-97	318	427	39.11
CNC64A_025G01180	Chlorella sp NC64A	2e-87	294	425	36.00
VC00G68920	Volvox carteri	2e-71	249	364	37.09
CR06G04470	Chlamydomonas reinhardtii	8e-70	246	371	38.27
OS09G26770	Oryza sativa	3e-60	216	370	35.14
emh181270	Emiliania huxleyi	6e-47	174	248	39.92
emh488170	Emiliania huxleyi	6e-47	174	248	39.92
OM_13G00450	Ostreococcus mediterraneus	1e-27	123	328	28.35
OT_14G02980	Ostreococcus tauri	2e-25	116	246	30.08
ORCC809_20G02860	Ostreococcus sp RCC809	3e-25	115	258	28.68
OL20G02910	Ostreococcus lucimarinus	1e-24	113	246	30.49
ATR_00067G00360	Amborella trichopoda	2e-21	96.3	130	51.54
ES0097G00210	Ectocarpus siliculosus	5e-19	96.3	298	28.86
ES0097G00300	Ectocarpus siliculosus	1e-18	94.7	303	29.04
PP00168G00010	Physcomitrella patens	5e-17	81.6	55	61.82
DDB_G0269124	Dictyostelium discoideum	4e-16	86.7	247	29.96
ES0200G00060	Ectocarpus siliculosus	8e-16	85.5	323	26.01
Naga_100049g27	Nannochloropsis gaditana	1e-15	84.7	289	25.26
Naga_100079g22	Nannochloropsis gaditana	2e-15	84.3	262	26.34
OS11G13650	Oryza sativa	7e-14	75.9	203	31.53
ccr13740	Chondrus crispus	7e-13	75.9	287	26.13
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	7e-13	76.3	237	27.43
ES0185G00090	Ectocarpus siliculosus	9e-13	75.9	324	24.69
PI00G46760	Picochlorum sp. SENEW3 (SE3)	1e-11	72.4	272	25.00
ES0097G00120	Ectocarpus siliculosus	2e-11	71.6	202	31.19
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	3e-11	70.5	266	27.07
RCC4223.10g01020	Picochlorum_RCC4223	5e-11	70.5	272	25.00
CV00G83580	Coccomyxa subellipsoidea C-169	5e-10	67.4	293	25.94
emh647580	Emiliania huxleyi	8e-10	66.2	247	24.29
PP00372G00370	Physcomitrella patens	2e-09	64.7	247	23.08
ccr65060	Chondrus crispus	6e-09	63.5	326	23.31
AP00G07320	Auxenochlorella protothecoides	1e-07	59.7	269	22.68
CV00G40830	Coccomyxa subellipsoidea C-169	1e-07	59.3	309	21.68
AC00G29940	Asterochloris sp. Cgr-DA1pho v2.0	3e-07	58.2	170	27.06
AC00G21740	Asterochloris sp. Cgr-DA1pho v2.0	7e-07	57.0	197	24.87
CV00G28250	Coccomyxa subellipsoidea C-169	1e-06	56.2	281	23.84
AC00G61190	Asterochloris sp. Cgr-DA1pho v2.0	2e-06	55.5	208	23.56
CV00G01670	Coccomyxa subellipsoidea C-169	2e-06	55.5	226	21.24
CV00G13860	Coccomyxa subellipsoidea C-169	5e-06	54.3	238	24.37

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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