Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00039G00130	Physcomitrella patens	0.0	627	310	100.00
PP00489G00060	Physcomitrella patens	1e-95	290	209	77.51
PP00129G00690	Physcomitrella patens	3e-95	291	204	78.92
PP00176G00030	Physcomitrella patens	2e-86	284	204	75.98
PP00267G00430	Physcomitrella patens	2e-85	264	191	76.96
PP00117G00870	Physcomitrella patens	2e-71	227	183	68.31
PP00471G00040	Physcomitrella patens	8e-68	219	175	70.29
PP00229G00430	Physcomitrella patens	4e-67	216	182	67.58
PP00822G00010	Physcomitrella patens	3e-66	214	143	74.83
PP00004G01990	Physcomitrella patens	2e-64	209	149	75.84
PP00117G00930	Physcomitrella patens	2e-64	207	149	74.50
PP00286G00420	Physcomitrella patens	1e-63	204	145	74.48
PP00117G00850	Physcomitrella patens	5e-63	207	145	75.17
PP00360G00160	Physcomitrella patens	2e-59	194	142	73.24
PP00332G00080	Physcomitrella patens	5e-48	164	126	65.87
PP00096G01170	Physcomitrella patens	6e-47	161	111	77.48
PP00360G00170	Physcomitrella patens	2e-45	158	121	67.77
PP00208G00300	Physcomitrella patens	2e-43	151	106	69.81
PP00489G00120	Physcomitrella patens	2e-40	148	101	74.26
PP00496G00110	Physcomitrella patens	2e-40	148	101	74.26
PP00117G00800	Physcomitrella patens	1e-39	144	126	58.73
PP00039G00050	Physcomitrella patens	5e-35	130	91	70.33
PP00039G00150	Physcomitrella patens	5e-33	128	129	53.49
PP00229G00380	Physcomitrella patens	2e-29	120	143	47.55
PP00251G00030	Physcomitrella patens	5e-29	112	69	79.71
PP00132G00470	Physcomitrella patens	4e-27	107	68	73.53
PP00471G00020	Physcomitrella patens	4e-27	113	74	71.62
PP00039G00180	Physcomitrella patens	1e-26	110	113	51.33
PP00001G00790	Physcomitrella patens	2e-26	105	60	78.33
PP00489G00140	Physcomitrella patens	4e-26	110	74	71.62
PP00496G00080	Physcomitrella patens	6e-26	109	74	71.62
PP00210G00010	Physcomitrella patens	1e-24	105	70	71.43
PP00251G00020	Physcomitrella patens	1e-24	107	68	75.00
PP00613G00070	Physcomitrella patens	3e-24	105	70	71.43
PP00211G00010	Physcomitrella patens	1e-22	98.2	55	78.18
PP00229G00370	Physcomitrella patens	2e-22	95.1	58	79.31
PP00129G00700	Physcomitrella patens	2e-21	97.4	60	73.33
PP00613G00060	Physcomitrella patens	6e-21	90.1	49	83.67
PP00208G00160	Physcomitrella patens	1e-18	89.4	119	44.54
OS07G07560	Oryza sativa	2e-15	80.9	140	37.86
PP00208G00570	Physcomitrella patens	7e-14	71.2	45	71.11
PP00131G00100	Physcomitrella patens	1e-13	75.5	52	71.15
PP00066G00950	Physcomitrella patens	1e-13	75.5	52	71.15
AT5G18190	Arabidopsis thaliana	2e-13	74.3	143	37.06
PP00039G00100	Physcomitrella patens	3e-13	71.2	36	88.89
PP00001G00780	Physcomitrella patens	7e-13	69.7	53	67.92
AT3G03940	Arabidopsis thaliana	8e-13	72.8	143	34.97
PP00211G00030	Physcomitrella patens	1e-12	66.6	39	79.49
OS01G56580	Oryza sativa	2e-12	71.2	142	34.51
PP01655G00010	Physcomitrella patens	3e-12	66.2	53	62.26
ATR_00056G00740	Amborella trichopoda	3e-12	70.9	56	62.50
ATR_00078G01780	Amborella trichopoda	6e-12	70.1	143	33.57
OS01G10150	Oryza sativa	1e-11	69.3	51	62.75
OS03G57940	Oryza sativa	1e-11	69.3	143	33.57
OS05G11140	Oryza sativa	8e-11	66.6	56	58.93
PP00117G00860	Physcomitrella patens	3e-10	62.8	47	65.96
AT2G25760	Arabidopsis thaliana	3e-10	64.7	52	61.54
AP00G54810	Auxenochlorella protothecoides	6e-10	63.9	74	45.95
CR16G05270	Chlamydomonas reinhardtii	7e-10	63.5	54	61.11
VC00G78160	Volvox carteri	7e-10	63.5	54	61.11
PP00208G00310	Physcomitrella patens	1e-09	58.9	30	86.67
CV00G41480	Coccomyxa subellipsoidea C-169	1e-09	63.2	43	67.44
AC00G23780	Asterochloris sp. Cgr-DA1pho v2.0	1e-09	62.8	54	59.26
CNC64A_004G04950	Chlorella sp NC64A	3e-09	62.0	54	57.41
PP00039G00060	Physcomitrella patens	3e-09	57.8	32	75.00
OS01G54100	Oryza sativa	4e-09	61.6	52	55.77
PP00096G01110	Physcomitrella patens	2e-08	57.0	40	67.50
AT3G13670	Arabidopsis thaliana	3e-08	58.9	52	55.77
AT3G03930	Arabidopsis thaliana	8e-08	56.6	43	62.79
ATR_00024G01320	Amborella trichopoda	8e-08	57.4	52	55.77
MP03G08100	Micromonas pusilla strain CCMP1545	1e-07	57.0	54	55.56
MRCC299_05G01370	Micromonas sp RCC299	2e-07	56.2	54	55.56
PI00G48380	Picochlorum sp. SENEW3 (SE3)	2e-07	56.2	54	51.85
RCC4223.15g01080	Picochlorum_RCC4223	2e-07	55.8	54	51.85
ORCC809_02G03800	Ostreococcus sp RCC809	6e-07	54.7	46	54.35
OL02G01140	Ostreococcus lucimarinus	7e-07	54.7	46	56.52
VC00G68260	Volvox carteri	1e-06	53.9	59	45.76
CR06G09250	Chlamydomonas reinhardtii	1e-06	53.9	59	45.76
HE0000G05520	Helicosporidium sp.	3e-06	52.0	44	54.55
BPRRCC1105_03G02050	Bathycoccus prasinos	4e-06	52.4	54	50.00
OM_04G04510	Ostreococcus mediterraneus	5e-06	52.0	46	52.17
OT_02G03460	Ostreococcus tauri	5e-06	51.6	46	52.17

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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