Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00036G01070	Physcomitrella patens	0.0	1123	539	100.00
PP00036G00370	Physcomitrella patens	0.0	1052	539	92.39
PP00065G00990	Physcomitrella patens	0.0	1045	539	91.84
ATR_00040G02570	Amborella trichopoda	0.0	766	531	66.48
AT5G03760	Arabidopsis thaliana	0.0	746	514	66.15
OS06G42020	Oryza sativa	0.0	729	533	63.98
AT5G22740	Arabidopsis thaliana	0.0	717	524	62.21
OS02G09930	Oryza sativa	0.0	702	517	63.83
AT1G23480	Arabidopsis thaliana	0.0	700	524	63.74
AT4G13410	Arabidopsis thaliana	0.0	658	514	57.39
AT2G35650	Arabidopsis thaliana	0.0	646	518	58.49
AT1G24070	Arabidopsis thaliana	0.0	637	509	57.56
OS03G07350	Oryza sativa	0.0	618	524	55.73
AT3G56000	Arabidopsis thaliana	0.0	612	513	56.73
OS08G33740	Oryza sativa	0.0	605	539	53.43
AT5G16190	Arabidopsis thaliana	0.0	597	454	61.89
OS02G51060	Oryza sativa	0.0	583	528	51.70
OS07G43710	Oryza sativa	0.0	563	516	50.58
OS03G26044	Oryza sativa	0.0	562	521	51.63
OS10G26630	Oryza sativa	0.0	560	515	52.62
OS06G12460	Oryza sativa	0.0	544	506	53.36
AT4G16590	Arabidopsis thaliana	2e-171	498	404	56.44
ATR_00072G01360	Amborella trichopoda	7e-171	494	314	71.34
PP00224G00220	Physcomitrella patens	8e-146	443	540	42.41
AT2G24630	Arabidopsis thaliana	4e-144	438	469	45.84
AT4G31590	Arabidopsis thaliana	5e-144	438	533	42.40
PP00373G00150	Physcomitrella patens	2e-143	436	453	46.36
AT3G28180	Arabidopsis thaliana	6e-143	435	430	49.07
PP00019G01110	Physcomitrella patens	5e-142	433	444	46.85
AT3G07330	Arabidopsis thaliana	7e-142	432	545	40.92
PP00015G00680	Physcomitrella patens	1e-141	432	431	46.87
PP00089G01080	Physcomitrella patens	2e-141	432	541	41.22
PP00162G00740	Physcomitrella patens	2e-140	429	542	41.33
ATR_00019G01680	Amborella trichopoda	8e-140	427	431	46.87
OS07G03260	Oryza sativa	3e-139	426	546	41.03
ATR_00065G00270	Amborella trichopoda	6e-139	426	439	45.33
PP00164G00010	Physcomitrella patens	6e-138	422	443	46.05
OS01G56130	Oryza sativa	8e-138	422	531	42.37
OS09G25900	Oryza sativa	4e-137	421	458	44.10
OS08G15420	Oryza sativa	8e-137	421	434	45.62
OS05G43530	Oryza sativa	2e-134	413	528	42.23
OS03G56060	Oryza sativa	5e-134	404	455	44.84
AT4G07960	Arabidopsis thaliana	6e-134	412	546	41.94
MRCC299_10G04230	Micromonas sp RCC299	7e-129	392	496	41.33
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	8e-129	394	503	40.36
ATR_00013G02120	Amborella trichopoda	2e-127	394	534	41.01
CV00G12800	Coccomyxa subellipsoidea C-169	1e-126	389	499	40.48
BPRRCC1105_06G01240	Bathycoccus prasinos	3e-126	390	445	42.02
PI00G51280	Picochlorum sp. SENEW3 (SE3)	2e-125	388	429	43.59
OM_17G00960	Ostreococcus mediterraneus	1e-123	382	521	36.47
MP16G01280	Micromonas pusilla strain CCMP1545	2e-123	378	445	40.90
RCC4223.04g03450	Picochlorum_RCC4223	7e-123	382	437	42.79
OT_17G00830	Ostreococcus tauri	2e-122	377	517	37.52
AP00G21430	Auxenochlorella protothecoides	9e-122	378	507	40.04
CV00G12810	Coccomyxa subellipsoidea C-169	4e-121	370	445	43.37
OL16G00900	Ostreococcus lucimarinus	3e-116	360	508	37.99
HE0000G41170	Helicosporidium sp.	2e-113	357	499	37.88
ORCC809_16G01780	Ostreococcus sp RCC809	3e-110	346	506	36.76
CNC64A_025G01180	Chlorella sp NC64A	4e-106	338	508	38.58
OS09G26770	Oryza sativa	3e-97	310	322	49.38
CR06G04470	Chlamydomonas reinhardtii	2e-71	246	365	37.81
VC00G68920	Volvox carteri	3e-71	244	363	36.91
emh181270	Emiliania huxleyi	6e-58	202	288	40.28
emh488170	Emiliania huxleyi	6e-58	202	288	40.28
PP00435G00020	Physcomitrella patens	5e-39	143	111	69.37
ORCC809_20G02860	Ostreococcus sp RCC809	1e-30	130	301	30.56
OL20G02910	Ostreococcus lucimarinus	2e-28	124	268	30.97
OM_13G00450	Ostreococcus mediterraneus	3e-28	123	263	29.66
OT_14G02980	Ostreococcus tauri	4e-25	114	250	28.00
Naga_100049g27	Nannochloropsis gaditana	2e-14	80.5	264	26.89
emh647580	Emiliania huxleyi	3e-13	76.6	265	26.42
PP00372G00370	Physcomitrella patens	4e-13	75.9	292	27.40
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	1e-12	74.7	258	25.19
PI00G60790	Picochlorum sp. SENEW3 (SE3)	1e-11	71.6	257	24.51
ES0200G00060	Ectocarpus siliculosus	2e-10	67.8	241	26.14
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	8e-10	65.9	345	24.64
CV00G83580	Coccomyxa subellipsoidea C-169	8e-10	65.9	374	24.87
ES0097G00300	Ectocarpus siliculosus	1e-09	65.5	261	27.97
ES0097G00210	Ectocarpus siliculosus	3e-09	64.3	209	26.79
AC00G29940	Asterochloris sp. Cgr-DA1pho v2.0	4e-09	63.5	349	24.07
ES0185G00090	Ectocarpus siliculosus	5e-09	63.2	311	25.72
CV00G40830	Coccomyxa subellipsoidea C-169	7e-09	62.8	294	24.15
CV00G13860	Coccomyxa subellipsoidea C-169	2e-08	61.2	368	21.74
RCC4223.10g01020	Picochlorum_RCC4223	3e-08	60.8	250	25.20
CM20G02670	Cyanidioschyzon merolae	7e-08	58.9	282	24.47
PI00G46760	Picochlorum sp. SENEW3 (SE3)	7e-08	59.7	147	28.57
AC00G61190	Asterochloris sp. Cgr-DA1pho v2.0	8e-08	58.9	288	23.26
CV00G28250	Coccomyxa subellipsoidea C-169	9e-08	59.3	373	21.72
AP00G07320	Auxenochlorella protothecoides	2e-07	58.2	296	24.32
AC00G02440	Asterochloris sp. Cgr-DA1pho v2.0	1e-06	55.8	336	24.11
CV00G01670	Coccomyxa subellipsoidea C-169	1e-06	55.5	356	22.19
DDB_G0269124	Dictyostelium discoideum	2e-06	54.7	164	24.39
AC00G28500	Asterochloris sp. Cgr-DA1pho v2.0	5e-06	53.5	236	25.85
AC00G54710	Asterochloris sp. Cgr-DA1pho v2.0	6e-06	53.5	246	26.42

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment