Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS05G03760	Oryza sativa	0.0	1213	602	100.00
AT5G58620	Arabidopsis thaliana	5e-142	432	633	42.97
AT3G55980	Arabidopsis thaliana	3e-135	414	624	40.71
AT2G40140	Arabidopsis thaliana	1e-130	403	600	41.50
AT2G41900	Arabidopsis thaliana	8e-121	381	648	38.89
ATR_00007G00600	Amborella trichopoda	2e-106	343	293	59.73
AT5G12850	Arabidopsis thaliana	9e-102	331	651	37.33
OS03G49170	Oryza sativa	6e-101	330	657	39.12
OS12G33090	Oryza sativa	1e-96	315	612	40.20
OS07G38090	Oryza sativa	5e-92	303	655	38.47
OT_04G00380	Ostreococcus tauri	2e-70	243	295	44.41
ORCC809_04G04820	Ostreococcus sp RCC809	2e-70	243	315	43.49
ATR_00103G01160	Amborella trichopoda	4e-70	246	229	53.71
OL04G00330	Ostreococcus lucimarinus	3e-69	240	325	42.77
OM_02G00410	Ostreococcus mediterraneus	3e-68	237	322	40.68
OS05G10670	Oryza sativa	3e-53	194	113	70.80
OS01G09620	Oryza sativa	3e-53	192	156	58.97
AT4G29190	Arabidopsis thaliana	7e-53	190	133	63.16
AP00G43750	Auxenochlorella protothecoides	1e-51	188	233	46.35
AT2G19810	Arabidopsis thaliana	2e-51	186	132	59.85
VC00G114470	Volvox carteri	5e-51	193	127	61.42
ATR_00183G00270	Amborella trichopoda	7e-51	185	117	66.67
PP00177G00540	Physcomitrella patens	8e-51	190	111	68.47
AT2G25900	Arabidopsis thaliana	3e-50	182	110	67.27
CNC64A_027G00460	Chlorella sp NC64A	4e-50	186	119	64.71
CR13G01070	Chlamydomonas reinhardtii	6e-50	189	114	64.04
ATR_00056G01910	Amborella trichopoda	7e-50	184	131	63.36
MRCC299_09G06170	Micromonas sp RCC299	1e-49	181	115	67.83
PP00297G00180	Physcomitrella patens	2e-49	186	111	66.67
AT1G03790	Arabidopsis thaliana	3e-49	181	116	62.07
PP00297G00210	Physcomitrella patens	3e-49	185	111	66.67
VC00G06970	Volvox carteri	8e-48	182	148	54.05
MP18G00140	Micromonas pusilla strain CCMP1545	1e-46	180	115	64.35
PI00G60270	Picochlorum sp. SENEW3 (SE3)	5e-46	175	133	54.89
RCC4223.02g07020	Picochlorum_RCC4223	5e-46	175	133	54.14
AT5G07500	Arabidopsis thaliana	7e-46	167	122	57.38
CR03G01290	Chlamydomonas reinhardtii	9e-46	177	327	36.70
CR07G03570	Chlamydomonas reinhardtii	2e-45	175	112	60.71
AT5G44260	Arabidopsis thaliana	3e-45	170	113	60.18
CNC64A_031G00050	Chlorella sp NC64A	5e-45	160	109	66.97
CV00G65940	Coccomyxa subellipsoidea C-169	9e-45	161	109	61.47
VC00G46840	Volvox carteri	3e-44	171	120	58.33
CV00G26700	Coccomyxa subellipsoidea C-169	7e-44	171	106	60.38
AC00G15200	Asterochloris sp. Cgr-DA1pho v2.0	4e-43	154	95	69.47
RCC4223.10g00130	Picochlorum_RCC4223	2e-42	161	109	58.72
PI00G20380	Picochlorum sp. SENEW3 (SE3)	2e-42	162	127	52.76
RCC4223.02g05210	Picochlorum_RCC4223	5e-42	161	127	51.97
HE0000G59730	Helicosporidium sp.	2e-41	154	215	41.40
PI00G69120	Picochlorum sp. SENEW3 (SE3)	2e-41	161	119	52.94
PI00G20210	Picochlorum sp. SENEW3 (SE3)	2e-41	158	109	56.88
OS05G45020	Oryza sativa	4e-41	154	152	50.66
PI00G52420	Picochlorum sp. SENEW3 (SE3)	1e-40	157	245	39.59
RCC4223.04g03100	Picochlorum_RCC4223	1e-40	159	118	52.54
CNC64A_032G00580	Chlorella sp NC64A	1e-40	159	123	55.28
AP00G21050	Auxenochlorella protothecoides	3e-40	154	129	53.49
CV00G62680	Coccomyxa subellipsoidea C-169	8e-40	146	122	50.00
CNC64A_022G00910	Chlorella sp NC64A	1e-39	156	121	53.72
CNC64A_011G02030	Chlorella sp NC64A	2e-39	157	111	58.56
RCC4223.27g00520	Picochlorum_RCC4223	2e-39	153	245	36.73
OS01G53650	Oryza sativa	5e-38	144	145	46.90
AC00G08770	Asterochloris sp. Cgr-DA1pho v2.0	9e-38	139	101	62.38
BPRRCC1105_07G00610	Bathycoccus prasinos	2e-37	148	121	52.89
HE0000G34190	Helicosporidium sp.	2e-37	140	101	57.43
CV00G26920	Coccomyxa subellipsoidea C-169	2e-36	136	102	56.86
CNC64A_011G02840	Chlorella sp NC64A	4e-36	147	123	49.59
HE0000G23110	Helicosporidium sp.	5e-36	137	114	50.88
CR03G00630	Chlamydomonas reinhardtii	2e-35	146	115	55.65
VC00G84140	Volvox carteri	4e-35	145	107	57.94
AC00G64350	Asterochloris sp. Cgr-DA1pho v2.0	4e-34	141	135	47.41
CR01G01910	Chlamydomonas reinhardtii	8e-34	141	106	52.83
PP00241G00660	Physcomitrella patens	2e-33	128	103	56.31
CR01G06770	Chlamydomonas reinhardtii	3e-33	139	107	54.21
AP00G63440	Auxenochlorella protothecoides	5e-33	135	140	45.71
VC00G66550	Volvox carteri	2e-32	137	125	47.20
VC00G18210	Volvox carteri	4e-32	137	120	52.50
CV00G00500	Coccomyxa subellipsoidea C-169	2e-29	116	93	51.61
OS07G47240	Oryza sativa	1e-26	114	113	51.33
CV00G85110	Coccomyxa subellipsoidea C-169	4e-18	91.7	57	66.67
AP00G48130	Auxenochlorella protothecoides	3e-15	82.8	59	61.02
ATR_00069G02120	Amborella trichopoda	9e-14	73.9	66	51.52
PP00117G00880	Physcomitrella patens	1e-13	71.6	56	58.93
PP00229G00440	Physcomitrella patens	2e-13	71.2	57	56.14
PP00001G00750	Physcomitrella patens	4e-13	73.2	71	49.30
PP00489G00090	Physcomitrella patens	6e-13	72.4	70	50.00
HE0000G46030	Helicosporidium sp.	2e-12	70.1	52	55.77
pte107710	Paramecium tetraurelia	4e-12	72.4	103	36.89
PP00489G00130	Physcomitrella patens	6e-12	66.6	54	55.56
ENSG00000132478	Homo sapiens	2e-11	71.2	172	33.14
PP00176G00050	Physcomitrella patens	2e-11	66.6	44	63.64
PP00117G00780	Physcomitrella patens	2e-11	66.6	49	59.18
CNC64A_022G00900	Chlorella sp NC64A	3e-11	67.4	41	58.54
pte177390	Paramecium tetraurelia	6e-11	68.9	101	36.63
PP00004G01980	Physcomitrella patens	6e-11	66.6	65	50.77
PP00039G00020	Physcomitrella patens	9e-11	64.7	65	50.77
PP00210G00040	Physcomitrella patens	9e-11	64.7	65	50.77
PP00117G00920	Physcomitrella patens	1e-10	64.3	65	50.77
PP00229G00420	Physcomitrella patens	2e-10	63.5	65	49.23
pte229880	Paramecium tetraurelia	3e-10	67.0	101	35.64
PP00471G00070	Physcomitrella patens	3e-10	64.3	45	60.00
PP00131G01070	Physcomitrella patens	7e-10	60.8	39	64.10
PP00360G00170	Physcomitrella patens	2e-09	61.6	48	56.25
PP00286G00400	Physcomitrella patens	2e-09	60.8	57	54.39
PP00415G00160	Physcomitrella patens	2e-09	60.5	44	61.36
FBgn0004395	Drosophila melanogaster	3e-09	63.9	109	33.94
PP00210G00050	Physcomitrella patens	3e-09	60.1	39	66.67
PP00822G00020	Physcomitrella patens	4e-09	58.5	39	64.10
PP00267G00440	Physcomitrella patens	6e-09	59.7	39	66.67
PP00613G00030	Physcomitrella patens	7e-09	59.7	44	59.09
FC009G02300	Fragilariopsis cylindrus	1e-08	62.4	197	31.47
PP00211G00050	Physcomitrella patens	1e-08	58.9	39	66.67
PP00325G00380	Physcomitrella patens	1e-08	57.0	39	64.10
WBGene00016407	Caenorhabditis elegans	3e-08	60.8	148	34.46
PP00327G00030	Physcomitrella patens	8e-08	56.2	65	46.15
PP00210G00070	Physcomitrella patens	1e-07	56.2	39	56.41
PP00613G00070	Physcomitrella patens	1e-07	58.2	95	36.84
PP00251G00010	Physcomitrella patens	2e-07	55.8	44	56.82
PP00613G00020	Physcomitrella patens	2e-07	53.9	44	52.27
PP00251G00050	Physcomitrella patens	3e-07	53.1	39	64.10
PP00251G00020	Physcomitrella patens	4e-07	57.0	49	51.02
pte551940	Paramecium tetraurelia	5e-07	56.6	127	29.92
PP00208G00050	Physcomitrella patens	6e-07	53.1	65	43.08
pte435530	Paramecium tetraurelia	7e-07	55.8	113	31.86
PP00415G00180	Physcomitrella patens	1e-06	55.1	48	52.08
pte220010	Paramecium tetraurelia	1e-06	55.1	112	32.14
PP00229G00380	Physcomitrella patens	1e-06	54.7	50	48.00
PP00095G00020	Physcomitrella patens	8e-06	48.9	39	61.54
pte483930	Paramecium tetraurelia	8e-06	52.8	127	29.13
PP00129G00680	Physcomitrella patens	9e-06	49.7	30	70.00
pte457040	Paramecium tetraurelia	9e-06	52.4	127	29.13

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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