Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
MP16G01280	Micromonas pusilla strain CCMP1545	0.0	1012	489	100.00
MRCC299_10G04230	Micromonas sp RCC299	0.0	700	488	69.06
OM_17G00960	Ostreococcus mediterraneus	0.0	628	488	63.32
OL16G00900	Ostreococcus lucimarinus	0.0	587	487	60.16
BPRRCC1105_06G01240	Bathycoccus prasinos	0.0	585	498	56.83
OT_17G00830	Ostreococcus tauri	0.0	579	487	58.32
ORCC809_16G01780	Ostreococcus sp RCC809	0.0	550	487	55.85
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	5e-170	497	484	50.83
PI00G51280	Picochlorum sp. SENEW3 (SE3)	7e-168	496	452	51.99
CV00G12800	Coccomyxa subellipsoidea C-169	1e-167	493	478	51.26
AP00G21430	Auxenochlorella protothecoides	4e-163	483	470	52.13
RCC4223.04g03450	Picochlorum_RCC4223	2e-162	482	460	50.22
CV00G12810	Coccomyxa subellipsoidea C-169	3e-152	448	446	53.36
HE0000G41170	Helicosporidium sp.	6e-152	454	452	50.88
CNC64A_025G01180	Chlorella sp NC64A	2e-131	402	464	47.63
PP00162G00740	Physcomitrella patens	8e-128	394	500	41.80
PP00373G00150	Physcomitrella patens	9e-128	394	499	41.28
PP00019G01110	Physcomitrella patens	2e-127	394	500	41.20
PP00065G00990	Physcomitrella patens	2e-127	389	446	42.15
AT5G03760	Arabidopsis thaliana	8e-127	387	445	42.25
PP00036G00370	Physcomitrella patens	1e-126	386	446	42.15
AT5G22740	Arabidopsis thaliana	3e-126	385	445	44.04
PP00224G00220	Physcomitrella patens	5e-126	390	502	39.64
PP00036G01070	Physcomitrella patens	6e-126	384	446	41.70
OS06G42020	Oryza sativa	1e-125	383	473	42.07
ATR_00040G02570	Amborella trichopoda	1e-124	381	445	42.70
PP00089G01080	Physcomitrella patens	1e-123	384	478	40.79
OS03G56060	Oryza sativa	1e-122	373	454	42.73
OS02G09930	Oryza sativa	6e-121	371	463	42.12
AT2G35650	Arabidopsis thaliana	7e-121	372	473	40.38
AT1G24070	Arabidopsis thaliana	9e-121	372	482	40.25
AT1G23480	Arabidopsis thaliana	2e-120	370	482	39.83
OS03G07350	Oryza sativa	9e-120	369	447	41.39
AT3G28180	Arabidopsis thaliana	2e-119	372	495	38.59
ATR_00019G01680	Amborella trichopoda	2e-119	372	463	41.68
AT4G31590	Arabidopsis thaliana	5e-119	371	464	41.16
OS08G33740	Oryza sativa	7e-119	368	475	41.05
OS07G03260	Oryza sativa	1e-118	370	487	40.66
AT4G07960	Arabidopsis thaliana	3e-118	370	482	40.87
AT4G13410	Arabidopsis thaliana	7e-118	363	482	39.00
AT3G07330	Arabidopsis thaliana	8e-118	368	500	40.20
OS09G25900	Oryza sativa	6e-117	366	465	41.94
OS08G15420	Oryza sativa	2e-116	366	376	47.34
AT3G56000	Arabidopsis thaliana	1e-115	358	485	38.14
PP00164G00010	Physcomitrella patens	2e-115	362	496	40.93
AT2G24630	Arabidopsis thaliana	4e-115	361	462	39.18
PP00015G00680	Physcomitrella patens	7e-115	361	496	39.72
OS07G43710	Oryza sativa	1e-114	357	445	40.22
OS03G26044	Oryza sativa	3e-113	353	446	41.70
AT5G16190	Arabidopsis thaliana	5e-113	348	445	40.90
ATR_00065G00270	Amborella trichopoda	8e-113	356	498	39.16
OS10G26630	Oryza sativa	9e-113	350	450	41.78
OS01G56130	Oryza sativa	1e-109	347	457	41.79
OS05G43530	Oryza sativa	3e-109	346	482	40.46
OS02G51060	Oryza sativa	1e-108	340	445	39.55
ATR_00013G02120	Amborella trichopoda	3e-107	340	480	38.33
AT4G16590	Arabidopsis thaliana	6e-106	328	404	39.60
OS06G12460	Oryza sativa	8e-99	317	511	36.40
ATR_00072G01360	Amborella trichopoda	2e-96	301	314	44.59
CR06G04470	Chlamydomonas reinhardtii	2e-81	271	453	36.87
VC00G68920	Volvox carteri	2e-77	259	443	35.44
OS09G26770	Oryza sativa	8e-55	197	322	36.02
emh181270	Emiliania huxleyi	9e-46	168	261	41.00
emh488170	Emiliania huxleyi	9e-46	168	261	41.00
ORCC809_20G02860	Ostreococcus sp RCC809	1e-23	108	266	30.83
OM_13G00450	Ostreococcus mediterraneus	1e-21	102	263	28.90
OL20G02910	Ostreococcus lucimarinus	2e-20	98.6	244	29.10
OT_14G02980	Ostreococcus tauri	7e-20	97.1	248	30.24
ES0097G00300	Ectocarpus siliculosus	2e-13	77.0	303	27.06
ES0185G00090	Ectocarpus siliculosus	4e-13	75.9	301	26.25
ES0200G00060	Ectocarpus siliculosus	1e-11	71.2	287	27.53
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	2e-11	70.1	250	26.00
ES0097G00210	Ectocarpus siliculosus	3e-11	70.1	295	26.10
PP00372G00370	Physcomitrella patens	7e-11	68.6	299	25.08
emh647580	Emiliania huxleyi	2e-10	67.4	308	22.73
PI00G60790	Picochlorum sp. SENEW3 (SE3)	3e-09	63.9	305	21.64
CV00G13860	Coccomyxa subellipsoidea C-169	4e-09	63.2	320	25.00
CV00G28250	Coccomyxa subellipsoidea C-169	4e-09	63.2	321	24.30
CV00G01670	Coccomyxa subellipsoidea C-169	2e-07	57.8	258	24.81
DDB_G0269124	Dictyostelium discoideum	1e-06	55.5	172	25.00
ES0097G00120	Ectocarpus siliculosus	4e-06	53.5	199	28.64

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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