Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
CV00G65940	Coccomyxa subellipsoidea C-169	7e-116	332	160	100.00
RCC4223.10g00130	Picochlorum_RCC4223	1e-67	216	138	65.94
PI00G20210	Picochlorum sp. SENEW3 (SE3)	1e-66	213	138	65.94
CNC64A_011G02840	Chlorella sp NC64A	3e-64	215	141	67.38
HE0000G34190	Helicosporidium sp.	3e-64	200	121	74.38
VC00G06970	Volvox carteri	8e-64	213	129	72.09
CNC64A_011G02030	Chlorella sp NC64A	2e-62	210	122	76.23
CR07G03570	Chlamydomonas reinhardtii	6e-62	209	110	79.09
PI00G20380	Picochlorum sp. SENEW3 (SE3)	4e-61	200	129	66.67
CNC64A_022G00910	Chlorella sp NC64A	2e-60	201	131	67.94
RCC4223.02g05210	Picochlorum_RCC4223	8e-60	197	129	65.89
CV00G62680	Coccomyxa subellipsoidea C-169	3e-57	182	110	70.91
AC00G64350	Asterochloris sp. Cgr-DA1pho v2.0	4e-56	192	167	59.88
AP00G63440	Auxenochlorella protothecoides	3e-53	181	131	61.83
HE0000G23110	Helicosporidium sp.	1e-52	171	119	62.18
VC00G114470	Volvox carteri	1e-46	167	148	52.03
CR13G01070	Chlamydomonas reinhardtii	2e-46	165	123	56.91
CR03G01290	Chlamydomonas reinhardtii	1e-45	164	130	57.69
CV00G26700	Coccomyxa subellipsoidea C-169	1e-45	164	116	58.62
PI00G60270	Picochlorum sp. SENEW3 (SE3)	1e-45	161	145	51.03
AT5G12850	Arabidopsis thaliana	2e-45	162	159	45.91
CNC64A_027G00460	Chlorella sp NC64A	3e-45	160	114	59.65
RCC4223.02g07020	Picochlorum_RCC4223	5e-45	160	145	49.66
VC00G46840	Volvox carteri	1e-44	159	110	62.73
OS12G33090	Oryza sativa	2e-44	159	108	62.04
PP00177G00540	Physcomitrella patens	2e-44	159	142	52.11
ORCC809_04G04820	Ostreococcus sp RCC809	3e-44	158	114	60.53
OM_02G00410	Ostreococcus mediterraneus	3e-44	158	114	57.89
OS05G03760	Oryza sativa	4e-44	158	109	61.47
MRCC299_09G06170	Micromonas sp RCC299	5e-44	154	144	50.69
AT5G58620	Arabidopsis thaliana	1e-43	156	120	55.00
OS07G38090	Oryza sativa	2e-43	156	154	47.40
ATR_00007G00600	Amborella trichopoda	3e-43	156	109	58.72
AT2G41900	Arabidopsis thaliana	3e-43	156	109	60.55
PP00297G00180	Physcomitrella patens	3e-43	155	111	58.56
OL04G00330	Ostreococcus lucimarinus	5e-43	154	136	52.94
OT_04G00380	Ostreococcus tauri	7e-43	154	114	59.65
ATR_00056G01910	Amborella trichopoda	1e-42	152	144	50.69
OS01G09620	Oryza sativa	1e-42	151	111	62.16
HE0000G59730	Helicosporidium sp.	1e-42	147	113	56.64
AT2G25900	Arabidopsis thaliana	2e-42	149	109	58.72
ATR_00183G00270	Amborella trichopoda	2e-42	150	109	58.72
OS03G49170	Oryza sativa	2e-42	154	110	58.18
CR01G01910	Chlamydomonas reinhardtii	4e-42	155	108	56.48
PI00G69120	Picochlorum sp. SENEW3 (SE3)	4e-42	152	142	47.18
ATR_00103G01160	Amborella trichopoda	4e-42	153	109	59.63
RCC4223.04g03100	Picochlorum_RCC4223	4e-42	152	154	46.10
OS05G10670	Oryza sativa	5e-42	151	109	61.47
AT2G40140	Arabidopsis thaliana	5e-42	152	113	59.29
AT1G03790	Arabidopsis thaliana	9e-42	149	127	49.61
PP00297G00210	Physcomitrella patens	1e-41	151	111	58.56
AC00G15200	Asterochloris sp. Cgr-DA1pho v2.0	1e-41	140	96	64.58
AT5G44260	Arabidopsis thaliana	2e-41	148	109	57.80
AT3G55980	Arabidopsis thaliana	3e-41	150	113	58.41
CNC64A_031G00050	Chlorella sp NC64A	3e-41	140	109	58.72
AT4G29190	Arabidopsis thaliana	7e-41	146	110	60.00
AT5G07500	Arabidopsis thaliana	1e-40	142	114	56.14
MP18G00140	Micromonas pusilla strain CCMP1545	2e-40	149	116	59.48
AP00G43750	Auxenochlorella protothecoides	3e-40	145	111	61.26
CNC64A_032G00580	Chlorella sp NC64A	3e-40	147	112	55.36
AT2G19810	Arabidopsis thaliana	3e-40	144	115	56.52
AP00G21050	Auxenochlorella protothecoides	8e-40	143	148	50.00
VC00G66550	Volvox carteri	2e-39	147	108	55.56
BPRRCC1105_07G00610	Bathycoccus prasinos	2e-38	140	122	53.28
CR01G06770	Chlamydomonas reinhardtii	1e-37	141	110	56.36
AC00G08770	Asterochloris sp. Cgr-DA1pho v2.0	2e-37	130	101	57.43
OS05G45020	Oryza sativa	7e-37	133	127	49.61
CR03G00630	Chlamydomonas reinhardtii	2e-36	138	105	57.14
CV00G26920	Coccomyxa subellipsoidea C-169	4e-36	127	105	53.33
PI00G52420	Picochlorum sp. SENEW3 (SE3)	4e-36	134	115	53.91
VC00G18210	Volvox carteri	7e-36	138	105	54.29
VC00G84140	Volvox carteri	9e-36	136	105	57.14
RCC4223.27g00520	Picochlorum_RCC4223	2e-35	132	115	53.04
OS01G53650	Oryza sativa	4e-35	128	108	52.78
AP00G48130	Auxenochlorella protothecoides	7e-30	117	64	79.69
PP00241G00660	Physcomitrella patens	9e-29	108	102	49.02
OS07G47240	Oryza sativa	2e-27	108	118	45.76
CV00G85110	Coccomyxa subellipsoidea C-169	7e-27	109	120	46.67
CV00G00500	Coccomyxa subellipsoidea C-169	1e-25	99.4	93	50.54
CNC64A_022G00900	Chlorella sp NC64A	9e-16	75.9	89	46.07
PP00229G00440	Physcomitrella patens	7e-14	67.4	56	57.14
PP00117G00880	Physcomitrella patens	3e-13	65.9	56	57.14
PP00001G00750	Physcomitrella patens	1e-12	66.6	71	42.25
PP00489G00130	Physcomitrella patens	4e-12	62.8	54	55.56
PP00489G00090	Physcomitrella patens	8e-12	64.3	70	42.86
HE0000G46030	Helicosporidium sp.	1e-11	63.2	46	58.70
pte107710	Paramecium tetraurelia	4e-11	64.3	85	41.18
PP00229G00420	Physcomitrella patens	1e-10	59.7	61	45.90
pte177390	Paramecium tetraurelia	3e-10	61.6	86	39.53
PP00039G00020	Physcomitrella patens	4e-10	58.2	61	44.26
PP00210G00040	Physcomitrella patens	4e-10	58.2	61	44.26
ENSG00000132478	Homo sapiens	4e-10	61.6	126	34.92
PP00117G00920	Physcomitrella patens	5e-10	57.8	61	44.26
FBgn0004395	Drosophila melanogaster	1e-09	60.5	115	33.91
pte229880	Paramecium tetraurelia	4e-09	58.5	85	38.82
pte220010	Paramecium tetraurelia	7e-09	57.8	97	36.08
WBGene00016407	Caenorhabditis elegans	7e-09	57.8	128	35.16
PP00004G01980	Physcomitrella patens	1e-08	55.5	62	41.94
ATR_00069G02120	Amborella trichopoda	5e-08	52.4	71	36.62
PP00251G00020	Physcomitrella patens	6e-08	55.1	48	54.17
pte435530	Paramecium tetraurelia	1e-07	54.3	94	34.04
PP00117G00780	Physcomitrella patens	1e-07	51.2	49	53.06
PP00327G00030	Physcomitrella patens	2e-07	51.2	56	42.86
PP00208G00050	Physcomitrella patens	2e-07	50.4	61	37.70
PP00176G00050	Physcomitrella patens	6e-07	48.9	50	44.00
pte379100	Paramecium tetraurelia	7e-07	51.2	118	32.20
PP00360G00170	Physcomitrella patens	1e-06	49.3	47	51.06
PP00176G00030	Physcomitrella patens	1e-06	50.8	49	51.02
PP00613G00070	Physcomitrella patens	3e-06	49.7	50	52.00
PP00415G00180	Physcomitrella patens	3e-06	49.7	48	52.08
pte551940	Paramecium tetraurelia	3e-06	49.7	162	27.16
PP00211G00050	Physcomitrella patens	3e-06	48.1	41	48.78
FC009G02300	Fragilariopsis cylindrus	5e-06	49.3	79	32.91
PP00267G00440	Physcomitrella patens	5e-06	47.4	41	48.78
pte88780	Paramecium tetraurelia	6e-06	48.5	123	30.89
PP00251G00050	Physcomitrella patens	8e-06	45.1	42	42.86
pte483930	Paramecium tetraurelia	8e-06	48.1	162	27.16

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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