Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
CV00G12810	Coccomyxa subellipsoidea C-169	0.0	909	438	100.00
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	0.0	706	439	76.08
CV00G12800	Coccomyxa subellipsoidea C-169	0.0	698	439	75.63
AP00G21430	Auxenochlorella protothecoides	0.0	618	443	67.95
PI00G51280	Picochlorum sp. SENEW3 (SE3)	0.0	616	440	65.68
RCC4223.04g03450	Picochlorum_RCC4223	0.0	606	448	64.06
HE0000G41170	Helicosporidium sp.	0.0	578	440	63.18
CNC64A_025G01180	Chlorella sp NC64A	5e-172	504	441	57.60
MP16G01280	Micromonas pusilla strain CCMP1545	1e-161	472	446	53.36
MRCC299_10G04230	Micromonas sp RCC299	3e-160	469	440	52.50
OL16G00900	Ostreococcus lucimarinus	6e-154	453	440	51.59
BPRRCC1105_06G01240	Bathycoccus prasinos	1e-151	452	437	50.57
OM_17G00960	Ostreococcus mediterraneus	5e-151	449	439	50.11
OT_17G00830	Ostreococcus tauri	2e-148	440	444	49.55
ORCC809_16G01780	Ostreococcus sp RCC809	3e-137	412	441	47.39
PP00036G00370	Physcomitrella patens	2e-127	387	445	43.15
PP00036G01070	Physcomitrella patens	3e-127	386	445	43.37
PP00065G00990	Physcomitrella patens	8e-127	385	445	43.15
OS06G42020	Oryza sativa	1e-122	374	448	43.75
ATR_00040G02570	Amborella trichopoda	3e-121	370	442	41.40
AT1G24070	Arabidopsis thaliana	2e-120	369	441	41.72
AT5G03760	Arabidopsis thaliana	2e-120	368	411	43.07
AT5G22740	Arabidopsis thaliana	3e-118	363	373	45.31
AT1G23480	Arabidopsis thaliana	1e-117	362	369	46.88
OS02G09930	Oryza sativa	1e-117	360	367	46.87
AT5G16190	Arabidopsis thaliana	4e-116	354	441	41.50
OS08G33740	Oryza sativa	2e-115	357	476	39.92
OS03G07350	Oryza sativa	2e-115	355	443	40.18
AT2G35650	Arabidopsis thaliana	3e-114	353	369	45.26
PP00224G00220	Physcomitrella patens	2e-113	355	471	38.85
AT2G24630	Arabidopsis thaliana	8e-113	353	464	40.95
AT4G13410	Arabidopsis thaliana	2e-112	347	442	40.50
PP00089G01080	Physcomitrella patens	3e-112	352	471	38.64
PP00019G01110	Physcomitrella patens	3e-111	349	380	43.95
AT4G31590	Arabidopsis thaliana	3e-111	349	465	41.08
PP00162G00740	Physcomitrella patens	5e-111	349	469	40.09
PP00373G00150	Physcomitrella patens	1e-110	348	367	44.41
OS08G15420	Oryza sativa	1e-110	349	364	46.15
OS03G56060	Oryza sativa	2e-109	337	365	45.48
AT3G56000	Arabidopsis thaliana	2e-109	340	371	43.13
AT3G07330	Arabidopsis thaliana	3e-109	344	461	39.26
OS07G43710	Oryza sativa	8e-109	340	439	38.95
OS02G51060	Oryza sativa	1e-108	338	441	39.91
OS03G26044	Oryza sativa	1e-108	339	444	39.41
AT3G28180	Arabidopsis thaliana	2e-108	342	368	44.84
OS09G25900	Oryza sativa	2e-108	342	367	44.41
ATR_00065G00270	Amborella trichopoda	2e-107	340	368	45.38
OS10G26630	Oryza sativa	7e-107	333	442	40.27
OS01G56130	Oryza sativa	4e-106	336	457	40.92
OS07G03260	Oryza sativa	3e-105	334	368	44.57
AT4G16590	Arabidopsis thaliana	3e-105	325	401	40.90
ATR_00019G01680	Amborella trichopoda	6e-105	333	368	43.48
AT4G07960	Arabidopsis thaliana	2e-104	332	460	39.78
OS05G43530	Oryza sativa	7e-103	327	458	40.17
PP00015G00680	Physcomitrella patens	9e-103	327	381	43.83
PP00164G00010	Physcomitrella patens	7e-102	325	381	44.62
ATR_00072G01360	Amborella trichopoda	5e-98	303	314	43.31
ATR_00013G02120	Amborella trichopoda	7e-98	313	368	42.93
OS06G12460	Oryza sativa	2e-96	308	392	40.05
CR06G04470	Chlamydomonas reinhardtii	7e-87	285	439	38.72
VC00G68920	Volvox carteri	2e-83	273	394	39.85
emh181270	Emiliania huxleyi	8e-59	202	251	47.01
emh488170	Emiliania huxleyi	8e-59	202	251	47.01
OS09G26770	Oryza sativa	5e-52	188	317	34.38
ORCC809_20G02860	Ostreococcus sp RCC809	1e-37	150	254	35.04
OM_13G00450	Ostreococcus mediterraneus	2e-34	140	242	34.71
OL20G02910	Ostreococcus lucimarinus	1e-33	139	242	33.88
OT_14G02980	Ostreococcus tauri	6e-28	120	245	33.88
ES0200G00060	Ectocarpus siliculosus	1e-16	86.3	298	29.53
ES0097G00210	Ectocarpus siliculosus	6e-14	78.2	231	28.57
emh647580	Emiliania huxleyi	1e-13	77.0	421	24.47
ES0097G00300	Ectocarpus siliculosus	5e-13	75.5	234	28.21
Naga_100049g27	Nannochloropsis gaditana	6e-13	74.7	258	25.97
PP00372G00370	Physcomitrella patens	4e-12	72.0	183	24.59
PI00G60790	Picochlorum sp. SENEW3 (SE3)	4e-11	69.3	270	24.44
DDB_G0269124	Dictyostelium discoideum	2e-10	67.0	175	26.86
ES0185G00090	Ectocarpus siliculosus	1e-08	61.2	262	25.57
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	9e-08	58.2	248	25.40
AC00G15120	Asterochloris sp. Cgr-DA1pho v2.0	2e-07	57.8	247	26.72
ccr13740	Chondrus crispus	2e-07	57.4	268	22.01
ccr65060	Chondrus crispus	3e-07	57.0	204	25.98
ES0097G00120	Ectocarpus siliculosus	8e-07	55.5	166	28.92
RCC4223.10g01020	Picochlorum_RCC4223	2e-06	54.7	308	23.70
PI00G46760	Picochlorum sp. SENEW3 (SE3)	2e-06	54.3	305	23.61
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	4e-06	53.1	150	25.33
ENSMUSG00000003665	Mus musculus	5e-06	52.8	244	21.31
AP00G07320	Auxenochlorella protothecoides	6e-06	52.8	348	22.99

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment