Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
CR17G09800	Chlamydomonas reinhardtii	0.0	1865	990	100.00
CR08G03260	Chlamydomonas reinhardtii	2e-45	179	258	56.98
CV00G78640	Coccomyxa subellipsoidea C-169	9e-37	149	259	37.45
RCC4223.05g03110	Picochlorum_RCC4223	2e-30	131	245	37.55
PI00G06430	Picochlorum sp. SENEW3 (SE3)	2e-29	128	246	36.99
VC00G31560	Volvox carteri	2e-29	129	265	48.68
AT3G08040	Arabidopsis thaliana	2e-27	121	269	35.69
AT4G38380	Arabidopsis thaliana	6e-27	120	156	43.59
PP00307G00460	Physcomitrella patens	7e-26	117	168	35.71
AT1G51340	Arabidopsis thaliana	1e-25	116	167	41.32
PP00088G01140	Physcomitrella patens	3e-25	115	193	34.72
ATR_00022G03920	Amborella trichopoda	5e-24	111	165	41.21
ATR_00001G00540	Amborella trichopoda	8e-24	111	185	35.14
ATR_00023G00030	Amborella trichopoda	1e-23	110	162	40.74
OS01G69010	Oryza sativa	1e-23	110	118	51.69
OS09G37610	Oryza sativa	3e-23	109	232	36.64
AT2G38330	Arabidopsis thaliana	2e-22	106	166	37.95
PP00010G00180	Physcomitrella patens	3e-22	107	140	45.71
OS03G11734	Oryza sativa	6e-21	102	118	45.76
ES0282G00160	Ectocarpus siliculosus	2e-20	98.2	144	40.28
OS10G13940	Oryza sativa	1e-19	97.8	235	33.62
MP02G06270	Micromonas pusilla strain CCMP1545	7e-18	92.4	169	36.09
PI00G23630	Picochlorum sp. SENEW3 (SE3)	3e-17	90.5	217	30.88
AC00G98560	Asterochloris sp. Cgr-DA1pho v2.0	1e-16	89.4	170	34.71
OS12G01580	Oryza sativa	2e-16	87.8	166	36.75
RCC4223.01g00960	Picochlorum_RCC4223	6e-16	86.3	222	29.73
CNC64A_003G00990	Chlorella sp NC64A	6e-15	82.8	252	37.30
MRCC299_07G01230	Micromonas sp RCC299	3e-14	80.9	113	41.59
OS02G58620	Oryza sativa	4e-14	81.3	77	53.25
ES0061G00060	Ectocarpus siliculosus	8e-14	79.0	139	35.25
TP09G03050	Thalassiosira pseudonana	2e-13	78.2	144	37.50
Naga_100034g7	Nannochloropsis gaditana	2e-13	78.6	187	29.41
CNC64A_008G03360	Chlorella sp NC64A	5e-13	77.0	148	35.81
PTI_22G01840	Phaeodactylum tricornutum	7e-13	76.3	129	38.76
Naga_100188g10	Nannochloropsis gaditana	9e-13	76.3	91	43.96
AC00G90710	Asterochloris sp. Cgr-DA1pho v2.0	1e-12	75.9	176	32.95
CM14G01150	Cyanidioschyzon merolae	3e-12	74.7	207	29.47
CV00G53940	Coccomyxa subellipsoidea C-169	1e-11	72.4	188	34.57
gsu46120	Galdieria sulphuraria	1e-11	72.4	133	31.58
TP08G04590	Thalassiosira pseudonana	1e-11	72.4	136	37.50
gsu46140	Galdieria sulphuraria	1e-11	72.0	133	31.58
Naga_100006g98	Nannochloropsis gaditana	3e-11	71.6	176	29.55
ccr132100	Chondrus crispus	5e-11	68.9	151	32.45
CNC64A_006G00900	Chlorella sp NC64A	8e-11	70.1	247	28.34
PP00109G00260	Physcomitrella patens	3e-10	67.8	157	33.12
PI00G68150	Picochlorum sp. SENEW3 (SE3)	9e-10	66.6	159	29.56
AA0001G03460	Aureococcus anophagefferens	1e-09	64.7	64	46.88
AP00G43440	Auxenochlorella protothecoides	2e-09	64.7	176	33.52
OS05G33910	Oryza sativa	2e-09	61.6	105	37.14
OS12G06050	Oryza sativa	3e-09	60.8	105	37.14
PTI_05G02420	Phaeodactylum tricornutum	4e-09	64.3	92	44.57
FC009G02500	Fragilariopsis cylindrus	9e-09	63.2	125	36.80
AA0013G01820	Aureococcus anophagefferens	1e-08	62.4	148	35.14
RCC4223.08g00790	Picochlorum_RCC4223	1e-08	62.4	156	29.49
FC005G05930	Fragilariopsis cylindrus	3e-08	61.6	109	33.94
ORCC809_04G04310	Ostreococcus sp RCC809	3e-08	62.0	159	30.19
ES0086G00080	Ectocarpus siliculosus	3e-08	61.6	191	28.80
PI00G61040	Picochlorum sp. SENEW3 (SE3)	4e-08	61.2	168	35.71
RCC4223.02g08020	Picochlorum_RCC4223	5e-08	60.5	149	36.91
MRCC299_11G00080	Micromonas sp RCC299	7e-08	60.1	101	36.63
emh666280	Emiliania huxleyi	9e-08	60.1	126	46.83
emh98570	Emiliania huxleyi	9e-08	60.1	126	46.83
FC001G02410	Fragilariopsis cylindrus	1e-07	59.3	82	40.24
CR04G02050	Chlamydomonas reinhardtii	2e-07	58.5	79	36.71
PTI_08G01330	Phaeodactylum tricornutum	3e-07	58.5	100	36.00
FC007G02470	Fragilariopsis cylindrus	3e-07	58.2	128	35.16
emh103410	Emiliania huxleyi	6e-07	57.4	75	41.33
emh324220	Emiliania huxleyi	6e-07	57.4	75	41.33
PTI_26G00430	Phaeodactylum tricornutum	7e-07	57.0	143	32.17
OM_02G01000	Ostreococcus mediterraneus	9e-07	57.0	143	32.87
CV00G54780	Coccomyxa subellipsoidea C-169	1e-06	55.8	90	42.22
CV00G02400	Coccomyxa subellipsoidea C-169	2e-06	55.8	159	30.82
OL16G01470	Ostreococcus lucimarinus	2e-06	55.8	80	41.25
AP00G30590	Auxenochlorella protothecoides	2e-06	55.1	121	41.32
emh348200	Emiliania huxleyi	3e-06	55.5	161	37.89
VC00G138900	Volvox carteri	4e-06	54.7	107	30.84
ES0033G00560	Ectocarpus siliculosus	5e-06	54.7	125	32.00
OT_04G00920	Ostreococcus tauri	8e-06	53.9	155	30.97

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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