Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G64060	Arabidopsis thaliana	0.0	1967	945	100.00
OS05G45210	Oryza sativa	0.0	1326	954	69.60
OS01G53294	Oryza sativa	0.0	1184	729	77.50
ATR_00007G03310	Amborella trichopoda	0.0	1097	961	57.34
AT4G11230	Arabidopsis thaliana	0.0	1085	810	65.80
ATR_00016G02960	Amborella trichopoda	0.0	1026	913	56.30
OS09G26660	Oryza sativa	0.0	986	836	57.42
OS11G33120	Oryza sativa	0.0	976	959	52.66
ATR_00023G01150	Amborella trichopoda	0.0	961	801	58.93
AT1G19230	Arabidopsis thaliana	0.0	960	929	53.28
AT5G47910	Arabidopsis thaliana	0.0	949	911	53.35
OS01G25820	Oryza sativa	0.0	949	933	51.23
AT5G51060	Arabidopsis thaliana	0.0	944	915	53.11
OS05G38980	Oryza sativa	0.0	920	787	58.07
AT1G09090	Arabidopsis thaliana	0.0	917	788	57.87
AT5G07390	Arabidopsis thaliana	0.0	902	791	56.51
ATR_00066G00130	Amborella trichopoda	0.0	900	844	54.74
AT4G25090	Arabidopsis thaliana	0.0	897	789	55.77
PP00241G00210	Physcomitrella patens	0.0	890	811	55.36
OS12G35610	Oryza sativa	0.0	885	915	50.05
OS01G61880	Oryza sativa	0.0	882	784	57.02
PP00018G00970	Physcomitrella patens	0.0	880	930	50.32
PP00032G00240	Physcomitrella patens	0.0	876	791	56.76
PP00010G00120	Physcomitrella patens	0.0	873	890	51.24
OS08G35210	Oryza sativa	0.0	866	901	51.05
AT5G60010	Arabidopsis thaliana	0.0	835	832	50.48
AT3G45810	Arabidopsis thaliana	0.0	805	937	46.00
phs237670	Phytophtora sojae	9e-99	337	693	31.17
phs237630	Phytophtora sojae	2e-96	330	691	30.25
DDB_G0289653	Dictyostelium discoideum	3e-90	303	568	32.57
DDB_G0287101	Dictyostelium discoideum	2e-86	298	601	33.11
ENSMUSG00000033268	Mus musculus	9e-81	292	602	30.23
ENSMUSG00000031257	Mus musculus	3e-78	272	629	29.89
ENSG00000137857	Homo sapiens	2e-76	279	602	30.07
ENSMUSG00000023802	Mus musculus	3e-76	266	616	29.71
ENSG00000074771	Homo sapiens	6e-75	263	642	28.19
ENSG00000007952	Homo sapiens	3e-74	260	627	30.78
AC00G58330	Asterochloris sp. Cgr-DA1pho v2.0	2e-73	256	520	31.35
FBgn0031464	Drosophila melanogaster	4e-73	269	755	25.03
phs60520	Phytophtora sojae	6e-73	263	581	30.81
phs60540	Phytophtora sojae	1e-72	263	581	30.81
DDB_G0291117	Dictyostelium discoideum	4e-72	263	735	26.94
ENSMUSG00000015340	Mus musculus	3e-70	249	627	30.30
WBGene00000253	Caenorhabditis elegans	5e-64	240	842	24.82
WBGene00018771	Caenorhabditis elegans	2e-60	229	839	25.86
ENSG00000255346	Homo sapiens	2e-57	215	551	28.68
emh555110	Emiliania huxleyi	7e-49	185	533	28.33
FBgn0085428	Drosophila melanogaster	5e-45	181	510	26.86
emh651380	Emiliania huxleyi	8e-42	170	585	27.86
gsu102990	Galdieria sulphuraria	4e-40	163	412	31.55
ENSG00000086991	Homo sapiens	3e-38	155	351	30.48
ccr153960	Chondrus crispus	4e-37	154	410	27.80
emh523420	Emiliania huxleyi	4e-34	141	376	30.32
RCC4223.04g02720	Picochlorum_RCC4223	7e-34	142	431	26.22
ccr18400	Chondrus crispus	3e-33	142	437	28.15
ccr158140	Chondrus crispus	4e-33	142	354	27.68
PP00170G00080	Physcomitrella patens	1e-30	126	116	55.17
ccr59700	Chondrus crispus	6e-28	125	390	27.95
CV00G15820	Coccomyxa subellipsoidea C-169	9e-28	123	157	40.76
emh152540	Emiliania huxleyi	5e-27	122	547	25.41
phs217300	Phytophtora sojae	2e-25	117	428	26.17
ES0229G00080	Ectocarpus siliculosus	4e-24	109	324	26.23
phs217320	Phytophtora sojae	1e-23	111	386	25.65
OS04G36720	Oryza sativa	1e-23	111	215	32.09
phs71150	Phytophtora sojae	1e-23	111	355	25.63
phs246280	Phytophtora sojae	4e-23	110	416	25.72
phs217280	Phytophtora sojae	4e-23	109	375	25.60
FC012G04580	Fragilariopsis cylindrus	2e-22	107	442	27.38
AT1G01580	Arabidopsis thaliana	2e-22	107	234	29.06
emh105430	Emiliania huxleyi	7e-22	102	406	24.38
AT5G23990	Arabidopsis thaliana	2e-21	104	215	31.16
PTI_07G00880	Phaeodactylum tricornutum	5e-21	103	499	23.45
ATR_00049G02400	Amborella trichopoda	5e-21	102	207	31.88
PP00054G00970	Physcomitrella patens	5e-21	102	348	24.71
AT5G49740	Arabidopsis thaliana	7e-21	102	212	31.13
AT5G50160	Arabidopsis thaliana	8e-21	102	214	31.31
PTI_20G01520	Phaeodactylum tricornutum	1e-20	102	241	33.20
PP00090G00030	Physcomitrella patens	2e-20	100	339	27.14
AT5G49730	Arabidopsis thaliana	6e-20	99.8	212	30.66
AT5G23980	Arabidopsis thaliana	7e-20	99.4	216	30.56
PP00014G01770	Physcomitrella patens	9e-20	99.0	220	29.09
TP03G00650	Thalassiosira pseudonana	2e-19	95.1	244	30.33
FC005G09830	Fragilariopsis cylindrus	3e-19	97.4	375	25.87
PP00663G00020	Physcomitrella patens	5e-19	96.7	406	21.92
AT1G23020	Arabidopsis thaliana	6e-19	96.3	215	26.98
AT1G01590	Arabidopsis thaliana	2e-18	94.7	216	27.78
phs306420	Phytophtora sojae	2e-18	94.0	223	29.60
PP00039G00550	Physcomitrella patens	4e-18	93.6	209	28.71
phs306480	Phytophtora sojae	6e-18	93.6	426	24.65
CR03G10290	Chlamydomonas reinhardtii	7e-18	92.8	156	32.05
CM07G00890	Cyanidioschyzon merolae	7e-18	93.2	246	30.89
CR03G10270	Chlamydomonas reinhardtii	9e-18	92.0	153	31.37
phs306900	Phytophtora sojae	1e-17	91.7	255	27.45
emh303920	Emiliania huxleyi	2e-17	87.0	128	36.72
phs274720	Phytophtora sojae	2e-17	91.7	444	23.65
phs231550	Phytophtora sojae	4e-17	91.3	481	23.49
ATR_00001G03290	Amborella trichopoda	4e-17	90.1	208	28.85
PP00105G00290	Physcomitrella patens	3e-16	87.4	211	30.81
RCC4223.01g02700	Picochlorum_RCC4223	3e-16	87.8	355	26.20
FC001G11770	Fragilariopsis cylindrus	1e-15	86.3	249	27.71
FC005G01030	Fragilariopsis cylindrus	3e-15	83.2	358	23.18
TP01G01400	Thalassiosira pseudonana	4e-15	82.8	253	29.25
emh182380	Emiliania huxleyi	3e-14	81.3	348	24.43
emh684150	Emiliania huxleyi	3e-14	81.3	348	24.43
phs217360	Phytophtora sojae	6e-14	80.1	355	24.23
CM18G03530	Cyanidioschyzon merolae	9e-14	80.1	336	24.70
ATR_00099G01510	Amborella trichopoda	2e-13	78.6	136	30.15
phs245140	Phytophtora sojae	2e-13	75.9	118	34.75
MP02G00970	Micromonas pusilla strain CCMP1545	3e-13	78.2	145	28.28
emh365880	Emiliania huxleyi	1e-12	75.9	355	24.79
OT_09G01830	Ostreococcus tauri	2e-12	75.5	436	20.87
OL16G00340	Ostreococcus lucimarinus	5e-12	73.9	393	22.39
OM_05G02860	Ostreococcus mediterraneus	2e-11	72.4	379	23.22
phs221810	Phytophtora sojae	9e-11	69.7	126	34.13
SPBC1683.09c	Schizosaccharomyces pombe	2e-10	68.6	267	23.60
AA0008G01190	Aureococcus anophagefferens	3e-10	68.6	351	21.94
FC042G01360	Fragilariopsis cylindrus	6e-10	67.0	216	26.85
ES0088G00340	Ectocarpus siliculosus	1e-08	63.5	354	22.88
ORCC809_04G00160	Ostreococcus sp RCC809	1e-08	63.5	379	21.64
phs341810	Phytophtora sojae	1e-08	63.2	397	23.68
phs351820	Phytophtora sojae	1e-08	61.2	82	42.68
TP23G00120	Thalassiosira pseudonana	3e-08	62.0	358	22.35
MRCC299_10G05290	Micromonas sp RCC299	3e-08	61.6	193	24.87
ES0088G00430	Ectocarpus siliculosus	3e-08	57.4	56	42.86
VC00G26600	Volvox carteri	6e-08	60.8	449	21.16
AP00G35770	Auxenochlorella protothecoides	1e-07	60.1	210	24.76
CV00G51060	Coccomyxa subellipsoidea C-169	1e-07	59.7	214	27.57
AP00G35780	Auxenochlorella protothecoides	1e-07	58.9	236	22.88
FC029G00910	Fragilariopsis cylindrus	2e-07	59.3	146	28.77
PTI_08G02300	Phaeodactylum tricornutum	2e-07	59.3	191	24.61
ES0145G00330	Ectocarpus siliculosus	4e-07	58.2	198	24.24
CR05G04660	Chlamydomonas reinhardtii	3e-06	55.1	141	26.24
TP19G03200	Thalassiosira pseudonana	4e-06	54.7	215	23.26
MP01G03560	Micromonas pusilla strain CCMP1545	4e-06	54.7	341	22.58
FC017G02310	Fragilariopsis cylindrus	5e-06	54.7	141	29.08
ES0088G00150	Ectocarpus siliculosus	6e-06	54.3	61	40.98

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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