Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G07700	Arabidopsis thaliana	2e-161	452	218	100.00
ATR_00091G00470	Amborella trichopoda	5e-66	208	126	79.37
OS02G35900	Oryza sativa	2e-59	192	118	76.27
PP00067G00050	Physcomitrella patens	2e-52	176	143	59.44
PP00273G00170	Physcomitrella patens	3e-50	169	119	64.71
AC00G54470	Asterochloris sp. Cgr-DA1pho v2.0	9e-48	162	124	59.68
CV00G64500	Coccomyxa subellipsoidea C-169	1e-32	120	94	54.26
CV00G84680	Coccomyxa subellipsoidea C-169	5e-16	77.4	125	31.20
CR03G00550	Chlamydomonas reinhardtii	5e-13	67.8	106	33.02
ENSMUSG00000028367	Mus musculus	6e-12	63.9	94	38.30
CNC64A_021G01000	Chlorella sp NC64A	1e-11	64.3	102	31.37
ES0104G00300	Ectocarpus siliculosus	4e-11	61.6	93	38.71
AT1G19730	Arabidopsis thaliana	5e-11	61.6	110	33.64
AT3G51030	Arabidopsis thaliana	8e-11	61.2	102	34.31
FBgn0040070	Drosophila melanogaster	3e-10	59.3	94	37.23
VC00G47360	Volvox carteri	3e-10	60.1	95	30.53
AT5G42980	Arabidopsis thaliana	3e-10	59.7	102	34.31
OS07G08840	Oryza sativa	1e-09	58.2	108	30.56
emh191800	Emiliania huxleyi	1e-09	57.8	119	31.93
AP00G14850	Auxenochlorella protothecoides	2e-09	57.4	102	31.37
ATR_00064G00990	Amborella trichopoda	2e-09	59.3	118	33.05
CM14G02790	Cyanidioschyzon merolae	3e-09	57.8	98	37.76
AT4G26160	Arabidopsis thaliana	5e-09	57.8	70	41.43
OS03G58630	Oryza sativa	6e-09	56.2	98	31.63
ES0164G00060	Ectocarpus siliculosus	6e-09	55.8	97	31.96
AA0016G01540	Aureococcus anophagefferens	6e-09	55.8	93	36.56
AT4G29670	Arabidopsis thaliana	7e-09	57.8	100	35.00
PTI_09G03860	Phaeodactylum tricornutum	1e-08	56.2	72	40.28
PI00G15160	Picochlorum sp. SENEW3 (SE3)	1e-08	55.8	99	30.30
CR09G03570	Chlamydomonas reinhardtii	2e-08	54.7	103	36.89
OS05G11090	Oryza sativa	2e-08	56.2	100	33.00
YLR043C	Saccharomyces cerevisiae strain S288C	2e-08	54.3	92	38.04
SPAC7D4.07c	Schizosaccharomyces pombe	3e-08	53.9	90	34.44
MP01G07180	Micromonas pusilla strain CCMP1545	3e-08	54.7	101	33.66
ORCC809_10G00440	Ostreococcus sp RCC809	3e-08	53.9	93	36.56
gsu111530	Galdieria sulphuraria	3e-08	53.5	94	32.98
OM_12G02480	Ostreococcus mediterraneus	4e-08	53.5	89	37.08
AA0005G05460	Aureococcus anophagefferens	5e-08	52.8	72	40.28
YGR209C	Saccharomyces cerevisiae strain S288C	5e-08	53.1	92	36.96
TP05G05230	Thalassiosira pseudonana	5e-08	53.1	106	31.13
Naga_100004g111	Nannochloropsis gaditana	5e-08	53.9	112	27.68
FC006G02910	Fragilariopsis cylindrus	6e-08	53.1	95	31.58
AT1G45145	Arabidopsis thaliana	6e-08	53.1	100	27.00
VC00G92300	Volvox carteri	7e-08	53.1	113	31.86
OS07G09310	Oryza sativa	7e-08	53.1	93	34.41
PP00021G01480	Physcomitrella patens	7e-08	53.1	102	30.39
emh449710	Emiliania huxleyi	1e-07	52.0	100	34.00
emh188520	Emiliania huxleyi	1e-07	52.0	100	34.00
BPRRCC1105_11G01170	Bathycoccus prasinos	1e-07	52.4	85	36.47
phs214450	Phytophtora sojae	2e-07	54.3	113	30.97
OS09G23650	Oryza sativa	2e-07	54.7	116	28.45
Naga_100013g39	Nannochloropsis gaditana	2e-07	51.6	72	41.67
PP00545G00070	Physcomitrella patens	3e-07	52.4	107	33.64
TP09G01510	Thalassiosira pseudonana	3e-07	50.8	88	31.82
CR01G12380	Chlamydomonas reinhardtii	3e-07	52.0	93	35.48
ATR_00060G01490	Amborella trichopoda	4e-07	51.2	102	32.35
OL10G01330	Ostreococcus lucimarinus	4e-07	50.8	93	34.41
FBgn0029752	Drosophila melanogaster	4e-07	51.6	86	33.72
FC014G04310	Fragilariopsis cylindrus	4e-07	50.4	84	40.48
ES0003G00380	Ectocarpus siliculosus	5e-07	52.0	112	32.14
Naga_100044g8	Nannochloropsis gaditana	5e-07	51.2	90	34.44
ATR_00002G04340	Amborella trichopoda	6e-07	50.8	113	29.20
RCC4223.04g04380	Picochlorum_RCC4223	6e-07	52.0	86	31.40
FC003G02520	Fragilariopsis cylindrus	6e-07	51.6	111	28.83
PI00G59070	Picochlorum sp. SENEW3 (SE3)	7e-07	50.1	90	34.44
RCC4223.12g01380	Picochlorum_RCC4223	7e-07	50.1	90	34.44
PP00012G00230	Physcomitrella patens	7e-07	51.6	106	29.25
FBgn0011761	Drosophila melanogaster	8e-07	50.1	92	30.43
WBGene00010160	Caenorhabditis elegans	9e-07	52.8	116	29.31
VC00G131430	Volvox carteri	1e-06	50.4	114	28.95
AC00G84940	Asterochloris sp. Cgr-DA1pho v2.0	1e-06	50.1	104	30.77
FC001G00080	Fragilariopsis cylindrus	1e-06	49.3	105	34.29
VC00G13850	Volvox carteri	1e-06	50.4	82	30.49
OM_12G00230	Ostreococcus mediterraneus	1e-06	51.2	96	34.38
OM_17G01890	Ostreococcus mediterraneus	2e-06	51.2	97	32.99
PP00136G00640	Physcomitrella patens	2e-06	49.3	106	32.08
OL16G01700	Ostreococcus lucimarinus	2e-06	48.5	102	31.37
PP00115G00410	Physcomitrella patens	2e-06	50.4	91	35.16
TP02G07400	Thalassiosira pseudonana	2e-06	48.1	72	36.11
emh215920	Emiliania huxleyi	2e-06	48.5	108	29.63
ATR_00002G04330	Amborella trichopoda	3e-06	49.3	131	26.72
TP22G01690	Thalassiosira pseudonana	3e-06	48.5	99	30.30
CV00G54700	Coccomyxa subellipsoidea C-169	3e-06	50.4	84	35.71
ccr44780	Chondrus crispus	3e-06	50.8	96	32.29
AT5G39950	Arabidopsis thaliana	3e-06	48.9	95	31.58
CM10G00970	Cyanidioschyzon merolae	3e-06	48.1	95	35.79
PTI_18G00650	Phaeodactylum tricornutum	4e-06	48.9	95	29.47
AC00G16260	Asterochloris sp. Cgr-DA1pho v2.0	6e-06	48.1	89	37.08
gsu64760	Galdieria sulphuraria	6e-06	50.1	94	32.98
PI00G18380	Picochlorum sp. SENEW3 (SE3)	6e-06	49.3	93	32.26
emh402400	Emiliania huxleyi	6e-06	48.1	108	29.63
Naga_100052g13	Nannochloropsis gaditana	6e-06	50.1	101	27.72
OT_03G00690	Ostreococcus tauri	6e-06	48.5	95	33.68
CR05G02020	Chlamydomonas reinhardtii	7e-06	48.5	112	31.25

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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