Functional clusters

Information

  • Type Gene Ontology
  • Description oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold1016 3 CH_calsi_282 4 6 0.000411759
Cenchrus purpureus GWHAORA00000013 3 CH_cpu_716 4 4 0.000152111
Oryza sativa ssp. japonica chr09 3 CH_osa_181 5 6 0.0000012145
Oryza sativa ssp. japonica chr04 3 CH_osa_249 5 9 0.000025154
Oryza sativa ssp. japonica chr07 3 CH_osa_442 4 6 0.00054776
Triticum dicoccoides 2A 3 CH_tdi_615 7 52 0.000694779
Zea mays B73 9 3 CH_zma_125 6 10 0.000000917163
Zea mays B73 7 3 CH_zma_144 5 6 0.00000386466
Calamus simplicifolius scaffold1016 4 CH_calsi_282 4 6 0.000411759
Cenchrus purpureus GWHAORA00000013 4 CH_cpu_716 4 4 0.000152111
Oryza sativa ssp. japonica chr09 4 CH_osa_181 5 6 0.0000012145
Oryza sativa ssp. japonica chr04 4 CH_osa_249 5 9 0.000025154
Oryza sativa ssp. japonica chr07 4 CH_osa_442 4 6 0.00054776
Triticum dicoccoides 2A 4 CH_tdi_615 7 52 0.000694779
Zea mays B73 9 4 CH_zma_125 6 10 0.000000917163
Zea mays B73 7 4 CH_zma_144 5 6 0.00000386466

Available child term results

Ontology identifier Description Number of clusters
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity 10
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity 2
GO:0003858 3-hydroxybutyrate dehydrogenase activity 2
GO:0003862 3-isopropylmalate dehydrogenase activity 4
GO:0003938 IMP dehydrogenase activity 12
GO:0003939 L-iditol 2-dehydrogenase activity 2
GO:0003979 UDP-glucose 6-dehydrogenase activity 12
GO:0004022 alcohol dehydrogenase (NAD+) activity 6
GO:0004024 alcohol dehydrogenase activity, zinc-dependent 2
GO:0004032 alditol:NADP+ 1-oxidoreductase activity 2
GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity 2
GO:0004345 glucose-6-phosphate dehydrogenase activity 6
GO:0004412 homoserine dehydrogenase activity 14
GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity 8
GO:0004449 isocitrate dehydrogenase (NAD+) activity 6
GO:0004455 ketol-acid reductoisomerase activity 2
GO:0004459 L-lactate dehydrogenase activity 42
GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity 2
GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity 4
GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity 10
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 38
GO:0008106 alcohol dehydrogenase (NADP+) activity 4
GO:0008442 3-hydroxyisobutyrate dehydrogenase activity 2
GO:0008465 glycerate dehydrogenase activity 2
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity 2
GO:0010301 xanthoxin dehydrogenase activity 12
GO:0016618 hydroxypyruvate reductase activity 66
GO:0018454 acetoacetyl-CoA reductase activity 38
GO:0030267 glyoxylate reductase (NADP+) activity 2
GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity 6
GO:0033707 3''-deamino-3''-oxonicotianamine reductase activity 6
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 4
GO:0034256 chlorophyll(ide) b reductase activity 6
GO:0045551 cinnamyl-alcohol dehydrogenase activity 8
GO:0046029 mannitol dehydrogenase activity 68
GO:0046554 malate dehydrogenase (NADP+) activity 2
GO:0047012 sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity 32
GO:0047501 (+)-neomenthol dehydrogenase activity 116
GO:0047560 3-dehydrosphinganine reductase activity 4
GO:0047641 aldose-6-phosphate reductase (NADPH) activity 6
GO:0047834 D-threo-aldose 1-dehydrogenase activity 278
GO:0047886 farnesol dehydrogenase activity 32
GO:0047995 hydroxyphenylpyruvate reductase activity 10
GO:0050236 pyridoxine:NADP 4-dehydrogenase activity 2
GO:0050268 coniferyl-alcohol dehydrogenase activity 4
GO:0050577 GDP-L-fucose synthase activity 2
GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity 6
GO:0052747 sinapyl alcohol dehydrogenase activity 2
GO:0070524 11-beta-hydroxysteroid dehydrogenase (NADP+) activity 14
GO:0102311 8-hydroxygeraniol dehydrogenase activity 16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001