Functional clusters
Information
- Type Gene Ontology
- Description mannitol dehydrogenase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00040 | 3 | CH_atr_27 | 5 | 5 | 0.00000000000000179262 |
| Brachypodium distachyon | Bd4 | 3 | CH_bdi_300 | 2 | 2 | 0.000616675 |
| Cenchrus purpureus | GWHAORA00000002 | 3 | CH_cpu_133 | 5 | 7 | 0.00000000000611132 |
| Cenchrus purpureus | GWHAORA00000176 | 3 | CH_cpu_807 | 3 | 10 | 0.000347542 |
| Digitaria exilis | Dexi_CM05836_chr02B | 3 | CH_dex_144 | 4 | 5 | 0.00000000101891 |
| Digitaria exilis | Dexi_CM05836_chr02A | 3 | CH_dex_163 | 4 | 6 | 0.00000000305619 |
| Eragrostis curvula | 3 | 3 | CH_ecu_80 | 6 | 11 | 1.91231e-16 |
| Glycine max | Gm01 | 3 | CH_gma_488 | 2 | 2 | 0.000379557 |
| Marchantia polymorpha | scaffold_32 | 3 | CH_mpo_25 | 4 | 6 | 0.000000000909196 |
| Miscanthus sinensis | Chr04 | 3 | CH_msi_584 | 2 | 2 | 0.000901568 |
| Oryza alta | GWHAZTO00000009 | 3 | CH_oal_757 | 2 | 2 | 0.000725448 |
| Oryza alta | GWHAZTO00000021 | 3 | CH_oal_758 | 2 | 2 | 0.000725448 |
| Oryza brachyantha | 9 | 3 | CH_obr_109 | 3 | 4 | 0.00000119875 |
| Oryza brachyantha | 8 | 3 | CH_obr_162 | 3 | 8 | 0.0000167729 |
| Oryza sativa ssp. indica | Chr9 | 3 | CH_osaindica_76 | 4 | 7 | 0.00000000101313 |
| Oryza sativa Kitaake | Chr9 | 3 | CH_osak_86 | 4 | 4 | 0.0000000000374499 |
| Oryza sativa ssp. japonica | chr09 | 3 | CH_osa_88 | 4 | 7 | 0.00000000108238 |
| Oropetium thomaeum | Chromosome_2 | 3 | CH_oth_193 | 2 | 2 | 0.000427107 |
| Phyllostachys edulis | hic_scaffold_22 | 3 | CH_ped_153 | 4 | 20 | 0.000000206102 |
| Phyllostachys edulis | hic_scaffold_18 | 3 | CH_ped_162 | 3 | 3 | 0.000000298843 |
| Panicum hallii | Chr02 | 3 | CH_pha_147 | 3 | 5 | 0.000000506471 |
| Populus trichocarpa | Chr09 | 3 | CH_ptr_256 | 3 | 4 | 0.00000112241 |
| Sorghum bicolor | Chr02 | 3 | CH_sbi_147 | 3 | 4 | 0.000000206509 |
| Secale cereale | GWHASIY00000006 | 3 | CH_sce_74 | 5 | 8 | 0.00000000000142885 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_1202 | 2 | 2 | 0.000292291 |
| Setaria italica | scaffold_2 | 3 | CH_sit_107 | 4 | 7 | 0.00000000143689 |
| Saccharum spontaneum | Chr2D | 3 | CH_ssp_270 | 3 | 3 | 0.000000388517 |
| Setaria viridis | Chr_02 | 3 | CH_svi_95 | 4 | 7 | 0.000000000521974 |
| Triticum aestivum | Chr6B | 3 | CH_tae_815 | 3 | 4 | 0.00000687717 |
| Triticum aestivum | Chr6D | 3 | CH_tae_904 | 3 | 5 | 0.0000171898 |
| Triticum dicoccoides | 6A | 3 | CH_tdi_284 | 3 | 4 | 0.00000431364 |
| Triticum turgidum | chr6A | 3 | CH_ttu_368 | 3 | 5 | 0.00000418932 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00039.1 | 3 | CH_zjn_83 | 3 | 7 | 0.00000603808 |
| Zea mays B73 | 7 | 3 | CH_zma_77 | 3 | 3 | 0.0000000392171 |
| Amborella trichopoda | AmTr_v1.0_scaffold00040 | 4 | CH_atr_27 | 5 | 5 | 0.00000000000000179262 |
| Brachypodium distachyon | Bd4 | 4 | CH_bdi_300 | 2 | 2 | 0.000616675 |
| Cenchrus purpureus | GWHAORA00000002 | 4 | CH_cpu_133 | 5 | 7 | 0.00000000000611132 |
| Cenchrus purpureus | GWHAORA00000176 | 4 | CH_cpu_807 | 3 | 10 | 0.000347542 |
| Digitaria exilis | Dexi_CM05836_chr02B | 4 | CH_dex_144 | 4 | 5 | 0.00000000101891 |
| Digitaria exilis | Dexi_CM05836_chr02A | 4 | CH_dex_163 | 4 | 6 | 0.00000000305619 |
| Eragrostis curvula | 3 | 4 | CH_ecu_80 | 6 | 11 | 1.91231e-16 |
| Glycine max | Gm01 | 4 | CH_gma_488 | 2 | 2 | 0.000379557 |
| Marchantia polymorpha | scaffold_32 | 4 | CH_mpo_25 | 4 | 6 | 0.000000000909196 |
| Miscanthus sinensis | Chr04 | 4 | CH_msi_584 | 2 | 2 | 0.000901568 |
| Oryza alta | GWHAZTO00000009 | 4 | CH_oal_757 | 2 | 2 | 0.000725448 |
| Oryza alta | GWHAZTO00000021 | 4 | CH_oal_758 | 2 | 2 | 0.000725448 |
| Oryza brachyantha | 9 | 4 | CH_obr_109 | 3 | 4 | 0.00000119875 |
| Oryza brachyantha | 8 | 4 | CH_obr_162 | 3 | 8 | 0.0000167729 |
| Oryza sativa ssp. indica | Chr9 | 4 | CH_osaindica_76 | 4 | 7 | 0.00000000101313 |
| Oryza sativa Kitaake | Chr9 | 4 | CH_osak_86 | 4 | 4 | 0.0000000000374499 |
| Oryza sativa ssp. japonica | chr09 | 4 | CH_osa_88 | 4 | 7 | 0.00000000108238 |
| Oropetium thomaeum | Chromosome_2 | 4 | CH_oth_193 | 2 | 2 | 0.000427107 |
| Phyllostachys edulis | hic_scaffold_22 | 4 | CH_ped_153 | 4 | 20 | 0.000000206102 |
| Phyllostachys edulis | hic_scaffold_18 | 4 | CH_ped_162 | 3 | 3 | 0.000000298843 |
| Panicum hallii | Chr02 | 4 | CH_pha_147 | 3 | 5 | 0.000000506471 |
| Populus trichocarpa | Chr09 | 4 | CH_ptr_256 | 3 | 4 | 0.00000112241 |
| Sorghum bicolor | Chr02 | 4 | CH_sbi_147 | 3 | 4 | 0.000000206509 |
| Secale cereale | GWHASIY00000006 | 4 | CH_sce_74 | 5 | 8 | 0.00000000000142885 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_1202 | 2 | 2 | 0.000292291 |
| Setaria italica | scaffold_2 | 4 | CH_sit_107 | 4 | 7 | 0.00000000143689 |
| Saccharum spontaneum | Chr2D | 4 | CH_ssp_270 | 3 | 3 | 0.000000388517 |
| Setaria viridis | Chr_02 | 4 | CH_svi_95 | 4 | 7 | 0.000000000521974 |
| Triticum aestivum | Chr6B | 4 | CH_tae_815 | 3 | 4 | 0.00000687717 |
| Triticum aestivum | Chr6D | 4 | CH_tae_904 | 3 | 5 | 0.0000171898 |
| Triticum dicoccoides | 6A | 4 | CH_tdi_284 | 3 | 4 | 0.00000431364 |
| Triticum turgidum | chr6A | 4 | CH_ttu_368 | 3 | 5 | 0.00000418932 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00039.1 | 4 | CH_zjn_83 | 3 | 7 | 0.00000603808 |
| Zea mays B73 | 7 | 4 | CH_zma_77 | 3 | 3 | 0.0000000392171 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |