Functional clusters
Information
- Type Gene Ontology
- Description hydroxypyruvate reductase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 2D | 3 | CH_ata_162 | 3 | 8 | 0.00000203621 |
| Brachypodium distachyon | Bd5 | 3 | CH_bdi_57 | 4 | 8 | 0.000000000738551 |
| Cenchrus purpureus | GWHAORA00000006 | 3 | CH_cpu_356 | 3 | 4 | 0.000000688022 |
| Digitaria exilis | Dexi_CM05836_chr06A | 3 | CH_dex_92 | 5 | 10 | 0.00000000000471735 |
| Eragrostis curvula | Contig44 | 3 | CH_ecu_40 | 10 | 33 | 5.66748e-24 |
| Elaeis guineensis | EG5.1_Chr11 | 3 | CH_egu_248 | 2 | 2 | 0.000568397 |
| Glycine max | Gm07 | 3 | CH_gma_64 | 4 | 4 | 0.00000000000246076 |
| Hordeum vulgare | chr2H | 3 | CH_hvu_36 | 5 | 9 | 0.0000000000000153806 |
| Lolium perenne | Lp_chr2_0 | 3 | CH_lpe_38 | 5 | 22 | 0.000000000000210774 |
| Musa acuminata | chr05 | 3 | CH_mac_280 | 2 | 2 | 0.000852273 |
| Miscanthus sinensis | Chr11 | 3 | CH_msi_106 | 4 | 8 | 0.0000000014717 |
| Oryza sativa ssp. indica | Chr4 | 3 | CH_osaindica_152 | 3 | 8 | 0.000000896554 |
| Oryza sativa Kitaake | Chr4 | 3 | CH_osak_74 | 4 | 5 | 0.0000000000133743 |
| Oryza sativa ssp. japonica | chr04 | 3 | CH_osa_65 | 4 | 5 | 0.0000000000773319 |
| Oropetium thomaeum | Chromosome_6 | 3 | CH_oth_20 | 5 | 17 | 0.0000000000250018 |
| Phyllostachys edulis | hic_scaffold_24 | 3 | CH_ped_176 | 3 | 4 | 0.000000557787 |
| Phyllostachys edulis | hic_scaffold_23 | 3 | CH_ped_177 | 3 | 4 | 0.000000557787 |
| Panicum hallii | Chr07 | 3 | CH_pha_142 | 3 | 6 | 0.000000405174 |
| Sorghum bicolor | Chr06 | 3 | CH_sbi_36 | 5 | 7 | 0.000000000000039185 |
| Secale cereale | GWHASIY00000007 | 3 | CH_sce_73 | 5 | 10 | 0.0000000000010229 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_186 | 5 | 5 | 8.87156e-16 |
| Setaria italica | scaffold_7 | 3 | CH_sit_58 | 5 | 8 | 0.000000000000266926 |
| Solanum lycopersicum | SL4.0ch03 | 3 | CH_sly_177 | 3 | 3 | 0.000000289388 |
| Spirodela polyrhiza | pseudo26 | 3 | CH_spo_136 | 2 | 2 | 0.000101921 |
| Saccharum spontaneum | Chr5A | 3 | CH_ssp_138 | 4 | 6 | 0.0000000011121 |
| Saccharum spontaneum | Chr5B | 3 | CH_ssp_351 | 3 | 4 | 0.00000191246 |
| Setaria viridis | Chr_07 | 3 | CH_svi_59 | 6 | 35 | 0.000000000000386142 |
| Triticum aestivum | Chr2A | 3 | CH_tae_401 | 4 | 7 | 0.00000000502591 |
| Triticum aestivum | Chr2D | 3 | CH_tae_402 | 4 | 7 | 0.00000000502591 |
| Triticum aestivum | Chr2B | 3 | CH_tae_900 | 3 | 6 | 0.0000161604 |
| Triticum dicoccoides | 2A | 3 | CH_tdi_138 | 4 | 7 | 0.00000000274841 |
| Triticum dicoccoides | 2B | 3 | CH_tdi_413 | 4 | 71 | 0.0000756489 |
| Triticum turgidum | chr2B | 3 | CH_ttu_153 | 4 | 7 | 0.0000000010575 |
| Aegilops tauschii | 2D | 4 | CH_ata_162 | 3 | 8 | 0.00000203621 |
| Brachypodium distachyon | Bd5 | 4 | CH_bdi_57 | 4 | 8 | 0.000000000738551 |
| Cenchrus purpureus | GWHAORA00000006 | 4 | CH_cpu_356 | 3 | 4 | 0.000000688022 |
| Digitaria exilis | Dexi_CM05836_chr06A | 4 | CH_dex_92 | 5 | 10 | 0.00000000000471735 |
| Eragrostis curvula | Contig44 | 4 | CH_ecu_40 | 10 | 33 | 5.66748e-24 |
| Elaeis guineensis | EG5.1_Chr11 | 4 | CH_egu_248 | 2 | 2 | 0.000568397 |
| Glycine max | Gm07 | 4 | CH_gma_64 | 4 | 4 | 0.00000000000246076 |
| Hordeum vulgare | chr2H | 4 | CH_hvu_36 | 5 | 9 | 0.0000000000000153806 |
| Lolium perenne | Lp_chr2_0 | 4 | CH_lpe_38 | 5 | 22 | 0.000000000000210774 |
| Musa acuminata | chr05 | 4 | CH_mac_280 | 2 | 2 | 0.000852273 |
| Miscanthus sinensis | Chr11 | 4 | CH_msi_106 | 4 | 8 | 0.0000000014717 |
| Oryza sativa ssp. indica | Chr4 | 4 | CH_osaindica_152 | 3 | 8 | 0.000000896554 |
| Oryza sativa Kitaake | Chr4 | 4 | CH_osak_74 | 4 | 5 | 0.0000000000133743 |
| Oryza sativa ssp. japonica | chr04 | 4 | CH_osa_65 | 4 | 5 | 0.0000000000773319 |
| Oropetium thomaeum | Chromosome_6 | 4 | CH_oth_20 | 5 | 17 | 0.0000000000250018 |
| Phyllostachys edulis | hic_scaffold_24 | 4 | CH_ped_176 | 3 | 4 | 0.000000557787 |
| Phyllostachys edulis | hic_scaffold_23 | 4 | CH_ped_177 | 3 | 4 | 0.000000557787 |
| Panicum hallii | Chr07 | 4 | CH_pha_142 | 3 | 6 | 0.000000405174 |
| Sorghum bicolor | Chr06 | 4 | CH_sbi_36 | 5 | 7 | 0.000000000000039185 |
| Secale cereale | GWHASIY00000007 | 4 | CH_sce_73 | 5 | 10 | 0.0000000000010229 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_186 | 5 | 5 | 8.87156e-16 |
| Setaria italica | scaffold_7 | 4 | CH_sit_58 | 5 | 8 | 0.000000000000266926 |
| Solanum lycopersicum | SL4.0ch03 | 4 | CH_sly_177 | 3 | 3 | 0.000000289388 |
| Spirodela polyrhiza | pseudo26 | 4 | CH_spo_136 | 2 | 2 | 0.000101921 |
| Saccharum spontaneum | Chr5A | 4 | CH_ssp_138 | 4 | 6 | 0.0000000011121 |
| Saccharum spontaneum | Chr5B | 4 | CH_ssp_351 | 3 | 4 | 0.00000191246 |
| Setaria viridis | Chr_07 | 4 | CH_svi_59 | 6 | 35 | 0.000000000000386142 |
| Triticum aestivum | Chr2A | 4 | CH_tae_401 | 4 | 7 | 0.00000000502591 |
| Triticum aestivum | Chr2D | 4 | CH_tae_402 | 4 | 7 | 0.00000000502591 |
| Triticum aestivum | Chr2B | 4 | CH_tae_900 | 3 | 6 | 0.0000161604 |
| Triticum dicoccoides | 2A | 4 | CH_tdi_138 | 4 | 7 | 0.00000000274841 |
| Triticum dicoccoides | 2B | 4 | CH_tdi_413 | 4 | 71 | 0.0000756489 |
| Triticum turgidum | chr2B | 4 | CH_ttu_153 | 4 | 7 | 0.0000000010575 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |