Functional clusters
Information
- Type Gene Ontology
- Description (+)-neomenthol dehydrogenase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_368 | 3 | CH_aag_33 | 4 | 5 | 0.0000000055431 |
| Ananas comosus | LG03 | 3 | CH_aco_28 | 3 | 4 | 0.0000000412805 |
| Asparagus officinalis | AsparagusV1_10 | 3 | CH_aof_107 | 2 | 2 | 0.000226775 |
| Aegilops tauschii | 2D | 3 | CH_ata_127 | 3 | 4 | 0.000000145479 |
| Brachypodium distachyon | Bd5 | 3 | CH_bdi_13 | 6 | 6 | 1.40506e-19 |
| Cenchrus purpureus | GWHAORA00000005 | 3 | CH_cpu_4 | 17 | 44 | 6.84462e-43 |
| Cenchrus purpureus | GWHAORA00000014 | 3 | CH_cpu_479 | 3 | 3 | 0.00000644366 |
| Dioscorea dumetorum | contig457 | 3 | CH_ddu_107 | 3 | 6 | 0.000000572717 |
| Digitaria exilis | Dexi_CM05836_chr07A | 3 | CH_dex_59 | 6 | 9 | 0.00000000000000794942 |
| Digitaria exilis | Dexi_CM05836_chr07B | 3 | CH_dex_64 | 6 | 10 | 0.0000000000000198684 |
| Digitaria exilis | Dexi_CM05836_chr01B | 3 | CH_dex_94 | 5 | 7 | 0.00000000000660848 |
| Eragrostis curvula | Contig30 | 3 | CH_ecu_17 | 12 | 24 | 5.52793e-32 |
| Eragrostis curvula | Contig239 | 3 | CH_ecu_447 | 3 | 3 | 0.00000299915 |
| Eragrostis curvula | 1 | 3 | CH_ecu_516 | 3 | 4 | 0.0000119932 |
| Elaeis guineensis | EG5.1_Chr4 | 3 | CH_egu_196 | 2 | 3 | 0.000284185 |
| Hordeum vulgare | chr2H | 3 | CH_hvu_48 | 5 | 8 | 0.000000000000287057 |
| Lolium perenne | Lp_chr2_0 | 3 | CH_lpe_45 | 5 | 16 | 0.00000000000195714 |
| Magnolia biondii | Chr18 | 3 | CH_mbi_510 | 2 | 2 | 0.000145698 |
| Miscanthus sinensis | Chr08 | 3 | CH_msi_11 | 9 | 13 | 1.10111e-22 |
| Miscanthus sinensis | Chr12 | 3 | CH_msi_16 | 8 | 9 | 3.07805e-21 |
| Miscanthus sinensis | Chr11 | 3 | CH_msi_38 | 6 | 6 | 0.00000000000000151704 |
| Miscanthus sinensis | Chr07 | 3 | CH_msi_46 | 7 | 20 | 0.0000000000000564911 |
| Oryza alta | GWHAZTO00000014 | 3 | CH_oal_254 | 3 | 4 | 0.000000535984 |
| Oryza alta | GWHAZTO00000016 | 3 | CH_oal_291 | 3 | 5 | 0.00000133986 |
| Oryza alta | GWHAZTO00000004 | 3 | CH_oal_318 | 3 | 6 | 0.0000026795 |
| Oryza alta | GWHAZTO00000002 | 3 | CH_oal_319 | 3 | 6 | 0.0000026795 |
| Oryza brachyantha | 4 | 3 | CH_obr_276 | 2 | 2 | 0.000358402 |
| Oryza sativa ssp. indica | Chr4 | 3 | CH_osaindica_28 | 5 | 7 | 0.0000000000000235589 |
| Oryza sativa Kitaake | Chr4 | 3 | CH_osak_44 | 5 | 6 | 0.0000000000000094856 |
| Oryza sativa ssp. japonica | chr04 | 3 | CH_osa_69 | 4 | 6 | 0.000000000099422 |
| Oropetium thomaeum | Chromosome_6 | 3 | CH_oth_9 | 5 | 6 | 0.00000000000000693378 |
| Phyllostachys edulis | hic_scaffold_3 | 3 | CH_ped_100 | 4 | 6 | 0.00000000150646 |
| Phyllostachys edulis | hic_scaffold_23 | 3 | CH_ped_173 | 3 | 3 | 0.00000054788 |
| Phyllostachys edulis | hic_scaffold_24 | 3 | CH_ped_44 | 5 | 6 | 0.0000000000000982325 |
| Panicum hallii | Chr07 | 3 | CH_pha_10 | 7 | 9 | 1.87346e-19 |
| Panicum hallii | Chr01 | 3 | CH_pha_86 | 4 | 5 | 0.00000000210428 |
| Sorghum bicolor | Chr06 | 3 | CH_sbi_17 | 7 | 7 | 1.02238e-19 |
| Sorghum bicolor | Chr04 | 3 | CH_sbi_26 | 7 | 10 | 1.22571e-17 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_40 | 5 | 5 | 0.00000000000000180494 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_176 | 5 | 5 | 2.53473e-16 |
| Setaria italica | scaffold_7 | 3 | CH_sit_14 | 8 | 8 | 2.10087e-24 |
| Setaria italica | scaffold_1 | 3 | CH_sit_202 | 3 | 3 | 0.00000183954 |
| Saccharum spontaneum | Chr5B | 3 | CH_ssp_417 | 3 | 3 | 0.00000510964 |
| Saccharum spontaneum | Chr4D | 3 | CH_ssp_56 | 7 | 28 | 0.0000000000000919758 |
| Saccharum spontaneum | Chr5A | 3 | CH_ssp_78 | 6 | 19 | 0.00000000000632382 |
| Setaria viridis | Chr_01 | 3 | CH_svi_211 | 3 | 3 | 0.00000185822 |
| Setaria viridis | Chr_07 | 3 | CH_svi_7 | 9 | 10 | 3.90033e-27 |
| Triticum aestivum | Chr2D | 3 | CH_tae_224 | 5 | 7 | 0.00000000000126832 |
| Triticum aestivum | Chr2A | 3 | CH_tae_50 | 7 | 7 | 2.22013e-21 |
| Triticum aestivum | Chr2B | 3 | CH_tae_98 | 6 | 6 | 1.18676e-17 |
| Triticum dicoccoides | 2A | 3 | CH_tdi_108 | 4 | 4 | 0.000000000142832 |
| Triticum dicoccoides | 2B | 3 | CH_tdi_58 | 5 | 5 | 0.0000000000000254409 |
| Triticum turgidum | chr2B | 3 | CH_ttu_293 | 3 | 3 | 0.00000066666 |
| Triticum turgidum | chr2A | 3 | CH_ttu_39 | 6 | 6 | 3.35847e-18 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00056.1 | 3 | CH_zjn_16 | 4 | 5 | 0.000000000159673 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 3 | CH_zjn_17 | 4 | 6 | 0.000000000478968 |
| Zea mays B73 | 10 | 3 | CH_zma_42 | 4 | 4 | 0.000000000198527 |
| Zea mays B73 | 4 | 3 | CH_zma_84 | 4 | 11 | 0.0000000654272 |
| Anthoceros agrestis | Sc2ySwM_368 | 4 | CH_aag_33 | 4 | 5 | 0.0000000055431 |
| Ananas comosus | LG03 | 4 | CH_aco_28 | 3 | 4 | 0.0000000412805 |
| Asparagus officinalis | AsparagusV1_10 | 4 | CH_aof_107 | 2 | 2 | 0.000226775 |
| Aegilops tauschii | 2D | 4 | CH_ata_127 | 3 | 4 | 0.000000145479 |
| Brachypodium distachyon | Bd5 | 4 | CH_bdi_13 | 6 | 6 | 1.40506e-19 |
| Cenchrus purpureus | GWHAORA00000005 | 4 | CH_cpu_4 | 17 | 44 | 6.84462e-43 |
| Cenchrus purpureus | GWHAORA00000014 | 4 | CH_cpu_479 | 3 | 3 | 0.00000644366 |
| Dioscorea dumetorum | contig457 | 4 | CH_ddu_107 | 3 | 6 | 0.000000572717 |
| Digitaria exilis | Dexi_CM05836_chr07A | 4 | CH_dex_59 | 6 | 9 | 0.00000000000000794942 |
| Digitaria exilis | Dexi_CM05836_chr07B | 4 | CH_dex_64 | 6 | 10 | 0.0000000000000198684 |
| Digitaria exilis | Dexi_CM05836_chr01B | 4 | CH_dex_94 | 5 | 7 | 0.00000000000660848 |
| Eragrostis curvula | Contig30 | 4 | CH_ecu_17 | 12 | 24 | 5.52793e-32 |
| Eragrostis curvula | Contig239 | 4 | CH_ecu_447 | 3 | 3 | 0.00000299915 |
| Eragrostis curvula | 1 | 4 | CH_ecu_516 | 3 | 4 | 0.0000119932 |
| Elaeis guineensis | EG5.1_Chr4 | 4 | CH_egu_196 | 2 | 3 | 0.000284185 |
| Hordeum vulgare | chr2H | 4 | CH_hvu_48 | 5 | 8 | 0.000000000000287057 |
| Lolium perenne | Lp_chr2_0 | 4 | CH_lpe_45 | 5 | 16 | 0.00000000000195714 |
| Magnolia biondii | Chr18 | 4 | CH_mbi_510 | 2 | 2 | 0.000145698 |
| Miscanthus sinensis | Chr08 | 4 | CH_msi_11 | 9 | 13 | 1.10111e-22 |
| Miscanthus sinensis | Chr12 | 4 | CH_msi_16 | 8 | 9 | 3.07805e-21 |
| Miscanthus sinensis | Chr11 | 4 | CH_msi_38 | 6 | 6 | 0.00000000000000151704 |
| Miscanthus sinensis | Chr07 | 4 | CH_msi_46 | 7 | 20 | 0.0000000000000564911 |
| Oryza alta | GWHAZTO00000014 | 4 | CH_oal_254 | 3 | 4 | 0.000000535984 |
| Oryza alta | GWHAZTO00000016 | 4 | CH_oal_291 | 3 | 5 | 0.00000133986 |
| Oryza alta | GWHAZTO00000004 | 4 | CH_oal_318 | 3 | 6 | 0.0000026795 |
| Oryza alta | GWHAZTO00000002 | 4 | CH_oal_319 | 3 | 6 | 0.0000026795 |
| Oryza brachyantha | 4 | 4 | CH_obr_276 | 2 | 2 | 0.000358402 |
| Oryza sativa ssp. indica | Chr4 | 4 | CH_osaindica_28 | 5 | 7 | 0.0000000000000235589 |
| Oryza sativa Kitaake | Chr4 | 4 | CH_osak_44 | 5 | 6 | 0.0000000000000094856 |
| Oryza sativa ssp. japonica | chr04 | 4 | CH_osa_69 | 4 | 6 | 0.000000000099422 |
| Oropetium thomaeum | Chromosome_6 | 4 | CH_oth_9 | 5 | 6 | 0.00000000000000693378 |
| Phyllostachys edulis | hic_scaffold_3 | 4 | CH_ped_100 | 4 | 6 | 0.00000000150646 |
| Phyllostachys edulis | hic_scaffold_23 | 4 | CH_ped_173 | 3 | 3 | 0.00000054788 |
| Phyllostachys edulis | hic_scaffold_24 | 4 | CH_ped_44 | 5 | 6 | 0.0000000000000982325 |
| Panicum hallii | Chr07 | 4 | CH_pha_10 | 7 | 9 | 1.87346e-19 |
| Panicum hallii | Chr01 | 4 | CH_pha_86 | 4 | 5 | 0.00000000210428 |
| Sorghum bicolor | Chr06 | 4 | CH_sbi_17 | 7 | 7 | 1.02238e-19 |
| Sorghum bicolor | Chr04 | 4 | CH_sbi_26 | 7 | 10 | 1.22571e-17 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_40 | 5 | 5 | 0.00000000000000180494 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_176 | 5 | 5 | 2.53473e-16 |
| Setaria italica | scaffold_7 | 4 | CH_sit_14 | 8 | 8 | 2.10087e-24 |
| Setaria italica | scaffold_1 | 4 | CH_sit_202 | 3 | 3 | 0.00000183954 |
| Saccharum spontaneum | Chr5B | 4 | CH_ssp_417 | 3 | 3 | 0.00000510964 |
| Saccharum spontaneum | Chr4D | 4 | CH_ssp_56 | 7 | 28 | 0.0000000000000919758 |
| Saccharum spontaneum | Chr5A | 4 | CH_ssp_78 | 6 | 19 | 0.00000000000632382 |
| Setaria viridis | Chr_01 | 4 | CH_svi_211 | 3 | 3 | 0.00000185822 |
| Setaria viridis | Chr_07 | 4 | CH_svi_7 | 9 | 10 | 3.90033e-27 |
| Triticum aestivum | Chr2D | 4 | CH_tae_224 | 5 | 7 | 0.00000000000126832 |
| Triticum aestivum | Chr2A | 4 | CH_tae_50 | 7 | 7 | 2.22013e-21 |
| Triticum aestivum | Chr2B | 4 | CH_tae_98 | 6 | 6 | 1.18676e-17 |
| Triticum dicoccoides | 2A | 4 | CH_tdi_108 | 4 | 4 | 0.000000000142832 |
| Triticum dicoccoides | 2B | 4 | CH_tdi_58 | 5 | 5 | 0.0000000000000254409 |
| Triticum turgidum | chr2B | 4 | CH_ttu_293 | 3 | 3 | 0.00000066666 |
| Triticum turgidum | chr2A | 4 | CH_ttu_39 | 6 | 6 | 3.35847e-18 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00056.1 | 4 | CH_zjn_16 | 4 | 5 | 0.000000000159673 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00004.1 | 4 | CH_zjn_17 | 4 | 6 | 0.000000000478968 |
| Zea mays B73 | 10 | 4 | CH_zma_42 | 4 | 4 | 0.000000000198527 |
| Zea mays B73 | 4 | 4 | CH_zma_84 | 4 | 11 | 0.0000000654272 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |