Functional clusters
Information
- Type Gene Ontology
- Description acetoacetyl-CoA reductase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr4 | 3 | CH_asa_208 | 3 | 5 | 0.0000000901065 |
| Amborella trichopoda | AmTr_v1.0_scaffold00049 | 3 | CH_atr_214 | 2 | 2 | 0.0000794407 |
| Eragrostis curvula | 1 | 3 | CH_ecu_250 | 4 | 9 | 0.0000000027749 |
| Glycine max | Gm11 | 3 | CH_gma_428 | 2 | 2 | 0.000227734 |
| Glycine max | Gm18 | 3 | CH_gma_429 | 2 | 2 | 0.000227734 |
| Oryza brachyantha | 4 | 3 | CH_obr_275 | 2 | 2 | 0.000358402 |
| Phyllostachys edulis | hic_scaffold_3 | 3 | CH_ped_266 | 3 | 8 | 0.0000167246 |
| Panicum hallii | Chr07 | 3 | CH_pha_119 | 3 | 4 | 0.000000081043 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_417 | 2 | 2 | 0.000346801 |
| Sorghum bicolor | Chr06 | 3 | CH_sbi_410 | 2 | 3 | 0.000527988 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_109 | 4 | 5 | 0.000000000178364 |
| Setaria italica | scaffold_7 | 3 | CH_sit_183 | 3 | 5 | 0.000000505296 |
| Setaria viridis | Chr_07 | 3 | CH_svi_180 | 3 | 5 | 0.000000408346 |
| Triticum aestivum | Chr2B | 3 | CH_tae_1365 | 2 | 2 | 0.000673438 |
| Triticum aestivum | Chr2A | 3 | CH_tae_1366 | 2 | 2 | 0.000673438 |
| Triticum aestivum | Chr2D | 3 | CH_tae_1367 | 2 | 2 | 0.000673438 |
| Triticum dicoccoides | 2A | 3 | CH_tdi_557 | 2 | 2 | 0.000445276 |
| Triticum dicoccoides | 2B | 3 | CH_tdi_558 | 2 | 2 | 0.000445276 |
| Triticum turgidum | chr2B | 3 | CH_ttu_446 | 2 | 2 | 0.0000312534 |
| Allium sativum | chr4 | 4 | CH_asa_208 | 3 | 5 | 0.0000000901065 |
| Amborella trichopoda | AmTr_v1.0_scaffold00049 | 4 | CH_atr_214 | 2 | 2 | 0.0000794407 |
| Eragrostis curvula | 1 | 4 | CH_ecu_250 | 4 | 9 | 0.0000000027749 |
| Glycine max | Gm11 | 4 | CH_gma_428 | 2 | 2 | 0.000227734 |
| Glycine max | Gm18 | 4 | CH_gma_429 | 2 | 2 | 0.000227734 |
| Oryza brachyantha | 4 | 4 | CH_obr_275 | 2 | 2 | 0.000358402 |
| Phyllostachys edulis | hic_scaffold_3 | 4 | CH_ped_266 | 3 | 8 | 0.0000167246 |
| Panicum hallii | Chr07 | 4 | CH_pha_119 | 3 | 4 | 0.000000081043 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_417 | 2 | 2 | 0.000346801 |
| Sorghum bicolor | Chr06 | 4 | CH_sbi_410 | 2 | 3 | 0.000527988 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_109 | 4 | 5 | 0.000000000178364 |
| Setaria italica | scaffold_7 | 4 | CH_sit_183 | 3 | 5 | 0.000000505296 |
| Setaria viridis | Chr_07 | 4 | CH_svi_180 | 3 | 5 | 0.000000408346 |
| Triticum aestivum | Chr2B | 4 | CH_tae_1365 | 2 | 2 | 0.000673438 |
| Triticum aestivum | Chr2A | 4 | CH_tae_1366 | 2 | 2 | 0.000673438 |
| Triticum aestivum | Chr2D | 4 | CH_tae_1367 | 2 | 2 | 0.000673438 |
| Triticum dicoccoides | 2A | 4 | CH_tdi_557 | 2 | 2 | 0.000445276 |
| Triticum dicoccoides | 2B | 4 | CH_tdi_558 | 2 | 2 | 0.000445276 |
| Triticum turgidum | chr2B | 4 | CH_ttu_446 | 2 | 2 | 0.0000312534 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |