Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG10G170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2630 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1871 Anthoceros agrestis
Actinidia07348 Actinidia chinensis
AL1G53090 Arabidopsis lyrata
AL1G62420 Arabidopsis lyrata
AL1G64340 Arabidopsis lyrata
Aqoxy3G04185_Aqoxy3G04186 Aquilegia oxysepala
Aqoxy7G03516 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KA488U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TD7I6F Arachis hypogaea
AT1G53720 Arabidopsis thaliana
ATR0763G204 Amborella trichopoda
Atru.chr1.189 Acer truncatum
Atru.chr1.190 Acer truncatum
AUR62027709 Chenopodium quinoa
AUR62037621 Chenopodium quinoa
AUR62039463 Chenopodium quinoa
AUR62040863 Chenopodium quinoa
AUR62041826 Chenopodium quinoa
BcaB04g16924 Brassica carinata
CAN.G943.34 Capsicum annuum
CANSAT80G1380 Cannabis sativa
CARHR044020 Cardamine hirsuta
CARHR248660 Cardamine hirsuta
Carub.0001s4300 Capsella rubella
Carub.0008s0543 Capsella rubella
Ca_12645_v3 Cicer arietinum L.
CBR_g2917 Chara braunii
CBR_g2919 Chara braunii
CBR_g2920 Chara braunii
Cc05_g16030 Coffea canephora
CDE01G0219 Ceratophyllum demersum
Cfa023095 Carpinus fangiana
Ciclev10004604m.g Citrus clementina
Ciclev10007155m.g Citrus clementina
CiPaw.01G119800 Carya illinoinensis
CiPaw.01G119900 Carya illinoinensis
ClCG09G022610 Citrullus lanatus
Cpa.g.sc331.2 Carica papaya
Cpa.g.sc331.3 Carica papaya
Cre11.g479850 Chlamydomonas reinhardtii
CsaV3_7G022770 Cucumis sativus L.
CSS0000259 Camellia sinensis var. sinensis
CSS0007376 Camellia sinensis var. sinensis
CSS0016392 Camellia sinensis var. sinensis
CSS0019207 Camellia sinensis var. sinensis
CSS0024659 Camellia sinensis var. sinensis
DCAR_013742 Daucus carota
DCAR_013743 Daucus carota
Dinv19621 Davidia involucrata
Duzib168G1061 Durio zibethinus
ECA240G3729 Erigeron canadensis
ECA248G1281 Erigeron canadensis
EL10Ac2g03350 Beta vulgaris
EL10Ac6g14407 Beta vulgaris
EL10Ac6g14412 Beta vulgaris
Eucgr.F01467 Eucalyptus grandis
Eucgr.F01469 Eucalyptus grandis
FAN11G2591 Fragaria x ananassa
FAN16G1651 Fragaria x ananassa
FAN21G1947 Fragaria x ananassa
FAN25G2080 Fragaria x ananassa
FvH4_3g15530 Fragaria vesca
FvH4_3g21900 Fragaria vesca
Glyma.15G213200 Glycine max
Glyma.19G004200 Glycine max
Gohir.A05G003300 Gossypium hirsutum
Gohir.D05G003701 Gossypium hirsutum
Gorai.009G003300 Gossypium raimondii
GSVIVG01020281001 Vitis vinifera
HanXRQChr05g0160881 Helianthus annuus
Haze_07837 Corylus avellana
Haze_07842 Corylus avellana
Haze_10874 Corylus avellana
Haze_25338 Corylus avellana
Haze_26935 Corylus avellana
HPP92_008853 Vanilla planifolia
HPP92_008859 Vanilla planifolia
Lalb_Chr01g0007211 Lupinus albus
Lj2g0001970 Lotus japonicus
Lj3g0013935 Lotus japonicus
Lj8A187T28 Lonicera japonica
Lsat_1_v5_gn_7_71321 Lactuca sativa
Manes.06G173850 Manihot esculenta
Mapoly0010s0175 Marchantia polymorpha
MBI01_g43614_MAGBIO Magnolia biondii
MBI01_g43617_MAGBIO Magnolia biondii
MCO01G120 Micromonas commoda
MD05G1222400 Malus domestica
MD10G1204000 Malus domestica
Medtr6g084140 Medicago truncatula
Medtr8g442420 Medicago truncatula
MELO3C012622.2 Cucumis melo
Migut.M01560 Erythranthe guttata
MSTRG.16112 Avicennia marina
Nitab4.5_0001749g0120 Nicotiana tabacum
Nitab4.5_0004242g0030 Nicotiana tabacum
Nitab4.5_0004242g0040 Nicotiana tabacum
Nitab4.5_0009317g0010 Nicotiana tabacum
Nn7g37935 Nelumbo nucifera
Oeu003830.4 Olea europaea
Os06g0670400 Oryza sativa ssp. japonica
Os06g0670500 Oryza sativa ssp. japonica
Peaxi162Scf00452g00848 Petunia axillaris
PGR119G1566 Punica granatum
PGSC0003DMG400004369 Solanum tuberosum
PGSC0003DMG400004370 Solanum tuberosum
PGSC0003DMG400017036 Solanum tuberosum
PGSC0003DMG400021758 Solanum tuberosum
PGSC0003DMG400022237 Solanum tuberosum
PGSC0003DMG400026878 Solanum tuberosum
Phvul.011G177175 Phaseolus vulgaris
Potri.005G097500 Populus trichocarpa
Potri.007G067000 Populus trichocarpa
Pp3c1_5600 Physcomitrium patens
PRCOL_00005663 Prasinoderma coloniale
Prupe.4G137900 Prunus persica
Psat4g174080 Pisum sativum
Psat4g174120 Pisum sativum
PSO447G0031 Papaver somniferum
PSO675G8491 Papaver somniferum
PSO675G9176 Papaver somniferum
PSO717G0129 Papaver somniferum
QL04p077101 Quercus lobata
QL04p077115 Quercus lobata
RcHm_v2.0_Chr5g0026161 Rosa chinensis
Sabra05G0079800 Salix brachista
Sc09g0007280 Simmondsia chinensis
Sed0018665 Sechium edule
SEGI_07963 Sequoiadendron giganteum
SEGI_08656 Sequoiadendron giganteum
SEGI_12892 Sequoiadendron giganteum
SEGI_40305 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03579 Striga asiatica
SHI21595 Sapria himalayana
SHI21597 Sapria himalayana
SHI21602 Sapria himalayana
SMO351G0536 Selaginella moellendorffii
SMO353G0235 Selaginella moellendorffii
Solyc02g061800.2 Solanum lycopersicum
Solyc07g066420.4 Solanum lycopersicum
Solyc09g018480.1 Solanum lycopersicum
Solyc12g038010.1 Solanum lycopersicum
Solyc12g038020.3 Solanum lycopersicum
Solyc12g038030.1 Solanum lycopersicum
Solyc12g038070.1 Solanum lycopersicum
Solyc12g038110.1 Solanum lycopersicum
Solyc12g038120.3 Solanum lycopersicum
Solyc12g038150.1 Solanum lycopersicum
Solyc12g049430.1 Solanum lycopersicum
Solyc12g089200.3 Solanum lycopersicum
Sopen02g012840 Solanum pennellii
Sopen07g034590 Solanum pennellii
Sopen12g023920 Solanum pennellii
Sopen12g023950 Solanum pennellii
Sopen12g031080 Solanum pennellii
Sp1g38950 Schrenkiella parvula
TAR626G0088 Trochodendron aralioides
THA.LOC104822756 Tarenaya hassleriana
THA.LOC104822789 Tarenaya hassleriana
Thecc.09G180900 Theobroma cacao
Thhalv10011414m.g Eutrema salsugineum
TPR.G22448 Trifolium pratense
TPR.G24716 Trifolium pratense
TPR.G9407 Trifolium pratense
TWI74G0164 Tripterygium wilfordii
unitig_26.g10081 Utricularia gibba
vmacro11660 Vaccinium macrocarpon
VMungo1127G1443 Vigna mungo
VMungo1127G1769 Vigna mungo
Zm00001eb274050 Zea mays

User provided reference genes

Program Settings