Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14464 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 2.1e-42 175.3 88 100.0
Rhsim01G0220300 Rhododendron simsii HOM05D003203 ORTHO05D003526 2.8e-34 148.3 85 84.7
vmacro14071 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 6.9e-33 143.7 87 79.3
Dinv32789 Davidia involucrata HOM05D003203 ORTHO05D003526 3.4e-32 141.4 85 81.2
CSS0047004 Camellia sinensis var. sinensis HOM05D003203 ORTHO05D003526 5.8e-32 140.6 83 83.1
TAR636G0568 Trochodendron aralioides HOM05D003203 ORTHO05D003526 6.4e-31 137.1 85 78.8
arahy.Tifrunner.gnm1.ann1.GJ7521 Arachis hypogaea HOM05D003203 ORTHO05D003526 7.1e-30 133.7 76 82.9
CANSAT54G1869 Cannabis sativa HOM05D003203 ORTHO05D003526 7.1e-30 133.7 75 81.3
FvH4_4g02320 Fragaria vesca HOM05D003203 ORTHO05D003526 7.1e-30 133.7 77 80.5
Potri.016G083100 Populus trichocarpa HOM05D003203 ORTHO05D003526 2.1e-29 132.1 85 74.1
QL01p037166 Quercus lobata HOM05D003203 ORTHO05D003526 2.7e-29 131.7 78 80.8
CiPaw.13G106900 Carya illinoinensis HOM05D003203 ORTHO05D003526 3.5e-29 131.3 85 75.3
RcHm_v2.0_Chr4g0389641 Rosa chinensis HOM05D003203 ORTHO05D003526 3.5e-29 131.3 85 72.9
GSVIVG01025133001 Vitis vinifera HOM05D003203 ORTHO05D003526 3.5e-29 131.3 85 76.5
arahy.Tifrunner.gnm1.ann1.DWB64P Arachis hypogaea HOM05D003203 ORTHO05D003526 4.6e-29 131.0 76 80.3
FAN12G0401 Fragaria x ananassa HOM05D003203 ORTHO05D003526 4.6e-29 131.0 77 79.2
QL11p006896 Quercus lobata HOM05D003203 ORTHO05D003526 4.6e-29 131.0 81 77.8
Sabra16G0090500 Salix brachista HOM05D003203 ORTHO05D003526 6.0e-29 130.6 85 71.8
Oeu005910.3 Olea europaea HOM05D003203 ORTHO05D003526 7.9e-29 130.2 85 74.1
MSTRG.21144 Avicennia marina HOM05D003203 ORTHO05D003526 1.3e-28 129.4 81 77.8
Lj3g0012673 Lotus japonicus HOM05D003203 ORTHO05D003526 1.3e-28 129.4 76 78.9
Lj3g0020808 Lotus japonicus HOM05D003203 ORTHO05D003526 1.3e-28 129.4 76 78.9
Eucgr.B02467 Eucalyptus grandis HOM05D003203 ORTHO05D003526 1.8e-28 129.0 83 72.3
Psat7g223280 Pisum sativum HOM05D003203 ORTHO05D003526 1.8e-28 129.0 85 71.8
TPR.G14912 Trifolium pratense HOM05D003203 ORTHO05D003526 1.8e-28 129.0 77 79.2
Lj1A185G36 Lonicera japonica HOM05D003203 ORTHO05D003526 2.3e-28 128.6 83 75.9
QL11p006907 Quercus lobata HOM05D003203 ORTHO05D003526 2.3e-28 128.6 81 76.5
Haze_23916 Corylus avellana HOM05D003203 ORTHO05D003526 3.0e-28 128.3 85 71.8
MD11G1129800 Malus domestica HOM05D003203 ORTHO05D003526 3.0e-28 128.3 85 71.8
Nn2g13009 Nelumbo nucifera HOM05D003203 ORTHO05D003526 3.0e-28 128.3 85 71.8
QL11p006401 Quercus lobata HOM05D003203 ORTHO05D003526 3.0e-28 128.3 76 80.3
Ca_19241_v3 Cicer arietinum L. HOM05D003203 ORTHO05D003526 3.9e-28 127.9 76 78.9
Ciclev10027702m.g Citrus clementina HOM05D003203 ORTHO05D003526 3.9e-28 127.9 80 77.5
Medtr4g060795 Medicago truncatula HOM05D003203 ORTHO05D003526 3.9e-28 127.9 85 72.9
THA.LOC104815752 Tarenaya hassleriana HOM05D003203 ORTHO05D003526 3.9e-28 127.9 85 69.4
Glyma.11G152960 Glycine max HOM05D003203 ORTHO05D003526 5.1e-28 127.5 76 78.9
Lalb_Chr03g0027111 Lupinus albus HOM05D003203 ORTHO05D003526 6.7e-28 127.1 77 76.6
Cfa011365 Carpinus fangiana HOM05D003203 ORTHO05D003526 8.7e-28 126.7 85 70.6
Duzib168G0563 Durio zibethinus HOM05D003203 ORTHO05D003526 8.7e-28 126.7 85 74.1
Cc01_g11550 Coffea canephora HOM05D003203 ORTHO05D003526 1.1e-27 126.3 82 74.4
Lj2C1036G7 Lonicera japonica HOM05D003203 ORTHO05D003526 1.1e-27 126.3 83 73.5
MELO3C005030.2 Cucumis melo HOM05D003203 ORTHO05D003526 1.5e-27 125.9 83 75.9
CsaV3_1G013020 Cucumis sativus L. HOM05D003203 ORTHO05D003526 1.5e-27 125.9 83 75.9
Lj1C185T11 Lonicera japonica HOM05D003203 ORTHO05D003526 1.9e-27 125.6 83 73.5
Sc15g0001570 Simmondsia chinensis HOM05D003203 ORTHO05D003526 1.9e-27 125.6 85 71.8
Atru.chr3.3693 Acer truncatum HOM05D003203 ORTHO05D003526 2.5e-27 125.2 75 77.3
DCAR_006042 Daucus carota HOM05D003203 ORTHO05D003526 2.5e-27 125.2 83 68.7
ATR1159G092 Amborella trichopoda HOM05D003203 ORTHO05D003526 3.3e-27 124.8 80 71.2
Thecc.09G260300 Theobroma cacao HOM05D003203 ORTHO05D003526 3.3e-27 124.8 85 71.8
Phvul.011G072500 Phaseolus vulgaris HOM05D003203 ORTHO05D003526 4.3e-27 124.4 76 76.3
PGR102G2647 Punica granatum HOM05D003203 ORTHO05D003526 4.3e-27 124.4 84 72.6
TWI31G0332 Tripterygium wilfordii HOM05D003203 ORTHO05D003526 4.3e-27 124.4 85 68.2
Cpa.g.sc139.65 Carica papaya HOM05D003203 ORTHO05D003526 9.6e-27 123.2 85 69.4
COL.COLO4_25248 Corchorus olitorius HOM05D003203 ORTHO05D003526 9.6e-27 123.2 85 70.6
PSO063G5461 Papaver somniferum HOM05D003203 ORTHO05D003526 9.6e-27 123.2 82 70.7
EL10Ac9g22449 Beta vulgaris HOM05D003203 ORTHO05D003526 1.3e-26 122.9 85 68.2
Zm00001eb302520 Zea mays HOM05D003203 ORTHO05D003526 1.3e-26 122.9 77 74.0
ClCG03G002340 Citrullus lanatus HOM05D003203 ORTHO05D003526 1.6e-26 122.5 83 74.7
DCAR_024905 Daucus carota HOM05D003203 ORTHO05D003526 1.6e-26 122.5 75 73.3
Migut.D02182 Erythranthe guttata HOM05D003203 ORTHO05D003526 1.6e-26 122.5 82 72.0
RcHm_v2.0_Chr1g0326771 Rosa chinensis HOM05D003203 ORTHO05D003526 1.6e-26 122.5 78 75.6
RcHm_v2.0_Chr5g0060751 Rosa chinensis HOM05D003203 ORTHO05D003526 1.6e-26 122.5 77 76.6
AUR62025015 Chenopodium quinoa HOM05D003203 ORTHO05D003526 2.1e-26 122.1 85 68.2
FAN16G3448 Fragaria x ananassa HOM05D003203 ORTHO05D003526 2.1e-26 122.1 77 76.6
Nn2g10680 Nelumbo nucifera HOM05D003203 ORTHO05D003526 2.1e-26 122.1 77 76.6
SGA_v2.0_scaffold97G29171 Striga asiatica HOM05D003203 ORTHO05D003526 2.1e-26 122.1 72 79.2
Prupe.6G094700 Prunus persica HOM05D003203 ORTHO05D003526 2.8e-26 121.7 84 70.2
SalBow3G4618 Salvia bowleyana HOM05D003203 ORTHO05D003526 2.8e-26 121.7 86 68.6
FAN22G0069 Fragaria x ananassa HOM05D003203 ORTHO05D003526 3.7e-26 121.3 77 74.0
Gohir.D05G077500 Gossypium hirsutum HOM05D003203 ORTHO05D003526 3.7e-26 121.3 85 70.6
SHI27628 Sapria himalayana HOM05D003203 ORTHO05D003526 3.7e-26 121.3 76 76.3
PSO339G5999 Papaver somniferum HOM05D003203 ORTHO05D003526 4.8e-26 120.9 82 69.5
FAN11G3892 Fragaria x ananassa HOM05D003203 ORTHO05D003526 6.2e-26 120.6 77 77.9
PSO765G0203 Papaver somniferum HOM05D003203 ORTHO05D003526 6.2e-26 120.6 82 68.3
Peaxi162Scf00389g00932 Petunia axillaris HOM05D003203 ORTHO05D003526 6.2e-26 120.6 83 71.1
Gohir.A05G074700 Gossypium hirsutum HOM05D003203 ORTHO05D003526 1.1e-25 119.8 85 69.4
Manes.11G141000 Manihot esculenta HOM05D003203 ORTHO05D003526 1.1e-25 119.8 85 67.1
AUR62006513 Chenopodium quinoa HOM05D003203 ORTHO05D003526 1.4e-25 119.4 85 64.7
Gorai.009G078900 Gossypium raimondii HOM05D003203 ORTHO05D003526 1.4e-25 119.4 85 70.6
Solyc11g072430.3 Solanum lycopersicum HOM05D003203 ORTHO05D003526 1.4e-25 119.4 83 69.9
Sopen11g030070 Solanum pennellii HOM05D003203 ORTHO05D003526 1.4e-25 119.4 83 69.9
Aqoxy3G02869 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 1.8e-25 119.0 85 63.5
HanXRQChr13g0401461 Helianthus annuus HOM05D003203 ORTHO05D003526 1.8e-25 119.0 82 69.5
FvH4_3g33360 Fragaria vesca HOM05D003203 ORTHO05D003526 3.1e-25 118.2 77 76.6
Sed0015984 Sechium edule HOM05D003203 ORTHO05D003526 4.0e-25 117.9 82 70.7
VMungo1127G1096 Vigna mungo HOM05D003203 ORTHO05D003526 4.0e-25 117.9 76 72.4
CAN.G352.40 Capsicum annuum HOM05D003203 ORTHO05D003526 5.3e-25 117.5 83 69.9
Aqoxy4G03208 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 6.9e-25 117.1 77 71.4
HPP92_010183 Vanilla planifolia HOM05D003203 ORTHO05D003526 9.0e-25 116.7 78 73.1
TAR633G1300 Trochodendron aralioides HOM05D003203 ORTHO05D003526 1.5e-24 115.9 77 74.0
Migut.N02091 Erythranthe guttata HOM05D003203 ORTHO05D003526 7.6e-24 113.6 82 69.5
ECA233G2891 Erigeron canadensis HOM05D003203 ORTHO05D003526 1.7e-23 112.5 82 67.1
SalBow6G0781 Salvia bowleyana HOM05D003203 ORTHO05D003526 1.7e-23 112.5 81 70.4
Aa31sc36G120 Aethionema arabicum HOM05D003203 ORTHO05D003526 2.2e-23 112.1 77 68.8
BcaC07g41968 Brassica carinata HOM05D003203 ORTHO05D003526 2.2e-23 112.1 85 63.5
C08p50260 Brassica napus HOM05D003203 ORTHO05D003526 2.2e-23 112.1 85 63.5
BolC8t52555H Brassica oleracea HOM05D003203 ORTHO05D003526 2.2e-23 112.1 85 63.5
Os07g0191700 Oryza sativa ssp. japonica HOM05D003203 ORTHO05D003526 2.2e-23 112.1 78 69.2
BcaC07g42504 Brassica carinata HOM05D003203 ORTHO05D003526 2.9e-23 111.7 85 63.5
A09p66110 Brassica napus HOM05D003203 ORTHO05D003526 2.9e-23 111.7 85 63.5
BraA09t41949Z Brassica rapa HOM05D003203 ORTHO05D003526 2.9e-23 111.7 85 63.5
Lsat_1_v5_gn_6_26241 Lactuca sativa HOM05D003203 ORTHO05D003526 1.9e-22 109.0 82 63.4
SpUn0400_0010 Schrenkiella parvula HOM05D003203 ORTHO05D003526 1.9e-22 109.0 85 60.0
Thhalv10006605m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 4.2e-22 107.8 85 60.0
CDE07G0291 Ceratophyllum demersum HOM05D003203 ORTHO05D003526 1.6e-21 105.9 77 61.0
A06p05020 Brassica napus HOM05D003203 ORTHO05D003526 2.1e-21 105.5 85 58.8
BraA06t23708Z Brassica rapa HOM05D003203 ORTHO05D003526 2.1e-21 105.5 85 58.8
C05p05960 Brassica napus HOM05D003203 ORTHO05D003526 2.7e-21 105.1 85 58.8
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 2.7e-21 105.1 85 58.8
Lsat_1_v5_gn_4_85140 Lactuca sativa HOM05D003203 ORTHO05D003526 7.9e-21 103.6 82 59.8
BcaC05g24708 Brassica carinata HOM05D003203 ORTHO05D003526 1.0e-20 103.2 85 57.6
Carub.0011s0009 Capsella rubella HOM05D003203 ORTHO05D003526 1.0e-20 103.2 85 55.3
AL6G53580 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 1.8e-20 102.4 85 57.6
BcaB02g06702 Brassica carinata HOM05D003203 ORTHO05D003526 1.8e-20 102.4 83 61.4
AT1G07910 Arabidopsis thaliana HOM05D003203 ORTHO05D003526 2.3e-20 102.1 85 57.6
AL7G46970 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 3.0e-20 101.7 85 57.6
Carub.0001s0725 Capsella rubella HOM05D003203 ORTHO05D003526 1.9e-19 99.0 85 55.3
SEGI_33151 Sequoiadendron giganteum HOM05D003203 ORTHO05D003526 2.5e-19 98.6 77 58.4
CARHR007720 Cardamine hirsuta HOM05D003203 ORTHO05D003526 6.9e-17 90.5 78 56.4
Nitab4.5_0001802g0140 Nicotiana tabacum HOM05D003203 ORTHO05D003526 1.0e-15 86.7 65 60.0
unitig_736.g22420 Utricularia gibba HOM05D003203 ORTHO05D003526 2.9e-15 85.1 57 68.4
Nitab4.5_0002129g0110 Nicotiana tabacum HOM05D003203 ORTHO05D003526 5.0e-15 84.3 65 58.5
TPR.G38645 Trifolium pratense HOM05D003203 ORTHO05D003526 5.5e-14 80.9 54 66.7
Lsat_1_v5_gn_6_107780 Lactuca sativa HOM05D004503 ORTHO05D003526 5.1e-12 74.3 61 57.4
Lsat_1_v5_gn_1_93381 Lactuca sativa HOM05D003203 ORTHO05D003526 2.0e-11 72.4 64 53.1
Lsat_1_v5_gn_2_120 Lactuca sativa HOM05D003203 ORTHO05D003526 2.5e-11 72.0 57 56.1
SMO223G0015 Selaginella moellendorffii HOM05D003203 ORTHO05D003526 9.7e-11 70.1 71 50.7
Pp3c27_2850 Physcomitrium patens HOM05D003203 ORTHO05D003526 8.2e-10 67.0 77 42.9
AagrBONN_evm.TU.Sc2ySwM_245.2 Anthoceros agrestis HOM05D003203 ORTHO05D003526 2.4e-09 65.5 70 48.6
AagrBONN_evm.TU.Sc2ySwM_362.2654 Anthoceros agrestis HOM05D003203 ORTHO05D003526 2.4e-09 65.5 70 48.6
AagrBONN_evm.TU.Sc2ySwM_117.4029 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-09 64.7 70 47.1
AagrBONN_evm.TU.Sc2ySwM_117.4032 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-09 64.7 70 47.1
AagrBONN_evm.TU.Sc2ySwM_117.4033 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-09 64.7 70 47.1
AagrBONN_evm.TU.Sc2ySwM_117.4034 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-09 64.7 70 47.1
AagrBONN_evm.TU.Sc2ySwM_244.3 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-09 64.7 70 47.1
AagrBONN_evm.TU.Sc2ySwM_246.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-09 64.7 70 47.1
AagrBONN_evm.TU.Sc2ySwM_341.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-09 64.7 70 47.1
AagrBONN_evm.TU.Sc2ySwM_341.2 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-09 64.7 70 47.1
AL1G18200 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 6.9e-09 63.9 85 43.5
Mapoly0005s0012 Marchantia polymorpha HOM05D003203 ORTHO05D003526 2.0e-08 62.4 73 42.5
FAN17G1981 Fragaria x ananassa HOM05D003203 ORTHO05D003526 3.2e-06 55.1 77 46.8


User provided reference genes

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