Gene: Lj2C1036G7

General Information

Structural Information

Species Lonicera japonica
Gene Identifier Lj2C1036G7
Transcript Identifier Lj2C1036G7.1
Gene Type Coding gene
Location GWHAAZE00000002 : 103597923-103615740 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003203
#Genes/#Species 213/97
Phylogenetic origin

ID ORTHO05D003526
#Genes/#Species 218/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Lj2C1036G7.1
Accession GWHGAAZE009148
Accession GWHTAAZE009158

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006388	IEA	InterPro	tRNA splicing, via endonucleolytic cleavage and ligation
GO:0010928	ISO	PLAZA Integrative Orthology	regulation of auxin mediated signaling pathway	AT1G07910
GO:0030968	ISO	PLAZA Integrative Orthology	endoplasmic reticulum unfolded protein response	AT1G07910
GO:0042245	ISO	PLAZA Integrative Orthology	RNA repair	AT1G07910

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003972	IEA	InterPro	RNA ligase (ATP) activity
GO:0051731	ISO	PLAZA Integrative Orthology	polynucleotide 5'-hydroxyl-kinase activity	AT1G07910
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G07910
GO:0004113	ISO	PLAZA Integrative Orthology	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity	AT1G07910

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005844	ISO	PLAZA Integrative Orthology	polysome	AT1G07910
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G07910

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR038837	tRNA ligase 1

Mapman id	Description
35.1	not assigned.annotated