Gene: SpUn0400_0010
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier SpUn0400_0010
- Transcript Identifier SpUn0400_0010.1
- Gene Type Coding gene
- Location un0400 : 3-4349 : negative
Gene Family Information
- ID HOM05D003203
- #Genes/#Species 213/97
- Phylogenetic origin
- ID ORTHO05D003526
- #Genes/#Species 218/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id SpUn0400_0010.v2.2
- pacid 45093447
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006388 | IEA | InterPro | tRNA splicing, via endonucleolytic cleavage and ligation | |
| GO:0010928 | ISO | PLAZA Integrative Orthology | regulation of auxin mediated signaling pathway | AT1G07910 |
| GO:0030968 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum unfolded protein response | AT1G07910 |
| GO:0042245 | ISO | PLAZA Integrative Orthology | RNA repair | AT1G07910 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003972 | IEA | InterPro | RNA ligase (ATP) activity | |
| GO:0051731 | ISO | PLAZA Integrative Orthology | polynucleotide 5'-hydroxyl-kinase activity | AT1G07910 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G07910 |
| GO:0004113 | ISO | PLAZA Integrative Orthology | 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity | AT1G07910 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005844 | ISO | PLAZA Integrative Orthology | polysome | AT1G07910 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G07910 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038837 | tRNA ligase 1 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |